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scnpilot_solids2_trim150_scaffold_57_curated_187

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 210063..210908

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein RteC family protein n=1 Tax=Empedobacter brevis RepID=UPI00037CA4AE similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 281.0
  • Bit_score: 512
  • Evalue 2.80e-142
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO09849.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 281.0
  • Bit_score: 520
  • Evalue 1.90e-144
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 281.0
  • Bit_score: 488
  • Evalue 1.00e-135

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Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 846
ATGGAAATCGTATTGAGTAAAATACTATCGCAAATTCGGCATCAGGAAAATAAATTTTCTTCTCAAATGATGCAAACATCGGAAGAGGCTTATAAAATGACCTTGTTCCTAAATGAGATGTTGTTTAATATAAAAGCCAAAGTTTTACAGGATGGATTTATAAATGAACAGCAGGAAATTGACTTCTTTAAGAATATTAAATCACAAATTTTAGGAAAACTTATTTACTATAATAAGGTATTCCGCATAGAAACGACCTGCCCCGTGAGCAATGGCAAAATACATCAAAGCTATTATGAGAACCTATTAAAAACACTCAAATCAGAATATAAAGAAAGTATCTGCAATGAGGATTTTTACAGGTATTATCGTGCAGGCAGGACAGACCGTGACCATAATTATTTCAGGCTCGGACAAATCAATTATCACGATGGATTAAAGAGTGGCGTATTTGAAATTGACCTTAGCTTTTCTACATATTACGATAACAAAGTTGCCCATATTATAGCCAATGAATTACTTTATACTTATATGCTTACCAAAATCAACCCCGAAGAAAACCCCGATACTATTTTACAAAATTTAGATGCAAATAAGGATATTTCGTGGACTAATTCACAAAACGCACTTATTGAATTGATTTACGCCCTATATGTTTCTAATTCTATCACACACGGTAAAATAGGTATCAGAAAATTAGCATTGATTTTTCAAATCTTATTCCGAACGCCCTTAAACGATATACATCATTCTTTCCACCGAATGAAAACAAGAGCAGGCTCCCGAACCGCGTTTTTAGACCAGCTCAAAATTTCCCTCGAAGAGTATATGGATAAAGACCTTTAG
PROTEIN sequence
Length: 282
MEIVLSKILSQIRHQENKFSSQMMQTSEEAYKMTLFLNEMLFNIKAKVLQDGFINEQQEIDFFKNIKSQILGKLIYYNKVFRIETTCPVSNGKIHQSYYENLLKTLKSEYKESICNEDFYRYYRAGRTDRDHNYFRLGQINYHDGLKSGVFEIDLSFSTYYDNKVAHIIANELLYTYMLTKINPEENPDTILQNLDANKDISWTNSQNALIELIYALYVSNSITHGKIGIRKLALIFQILFRTPLNDIHHSFHRMKTRAGSRTAFLDQLKISLEEYMDKDL*