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scnpilot_solids2_trim150_scaffold_35_curated_17

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 21152..21694

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K2P8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 276
  • Evalue 1.70e-71
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFC21033.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 180.0
  • Bit_score: 290
  • Evalue 2.00e-75
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 180.0
  • Bit_score: 265
  • Evalue 1.60e-68

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAGACGAATCCCTCTTATCGTTGATCCAGCTGGCCAAGGACAAAAACCAGAAAGCACAAACGCAACTGATCAATCTGTTCTGGGTGGATGTGTTCACTTTTGTTCTGCATAAGGTGAGGGATGAGAATGATGCAGATGAAATTACCGTCAGTGTTTTCTCGAAAATCCTCAACAAACTGGATTTGTATGATCCGGCTTTTCAGTTTAAAACCTGGATGCTCACCATAGCACAGAATACAGTAATCGATTTTTGGAGAAAGAAAAGCCGCGATAACGAAGATCCGACAGATGAAATTCACCATTTCAGAAATCAGTTCGCACAATCGCCGGAAGAGTTGATGATTTCGGAAGAAGAACAGGAGAAAATCCTTAAAATCATCGAAAGTATGGATACCAAAAATCAAGAGATTATCCGTCTTCGTTTTTTTGAGGAAAAAAGCATTAAAGAAATCGCAGAAGAACTGCAGCTGTCGGTTTCCAATACCAAAGTGCGCATTATGCGCGCCAAAAAATTACTTGCAGAACTTTTAAAAGAATAA
PROTEIN sequence
Length: 181
MKDESLLSLIQLAKDKNQKAQTQLINLFWVDVFTFVLHKVRDENDADEITVSVFSKILNKLDLYDPAFQFKTWMLTIAQNTVIDFWRKKSRDNEDPTDEIHHFRNQFAQSPEELMISEEEQEKILKIIESMDTKNQEIIRLRFFEEKSIKEIAEELQLSVSNTKVRIMRAKKLLAELLKE*