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scnpilot_solids2_trim150_scaffold_35_curated

Search features with annotation key words

Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_35_curated_1
unknown

Not on your lists

873..3341
DNA (2469bp) protein (823aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_35_curated_2
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3477..4124
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3P7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF23492.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_35_curated_3
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4225..5697
DNA (1473bp) protein (491aa)
Permease, YjgP/YjgQ family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3P8_9FLAO
Permease {ECO:0000313|EMBL:KFF20680.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_35_curated_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5782..6102
DNA (321bp) protein (107aa)
Rhodanese-like protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W0_SPHS2
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:ADZ80125.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_35_curated_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6197..6523)
DNA (327bp) protein (109aa)
cupin n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F07A6
cupin domain-containing protein
Cupin domain protein {ECO:0000313|EMBL:AEW21678.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
scnpilot_solids2_trim150_scaffold_35_curated_6
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6550..6846)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PNC6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54055.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_35_curated_7
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6893..9406)
DNA (2514bp) protein (838aa)
ATPase P (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
ATPase P n=1 Tax=Galbibacter marinus RepID=K2PNC4_9FLAO
ATPase P {ECO:0000313|EMBL:EKF54050.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
scnpilot_solids2_trim150_scaffold_35_curated_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(9420..10544)
DNA (1125bp) protein (375aa)
Chromate transporter, chromate ion transporter (CHR) family n=2 Tax=Flavobacterium RepID=A5FFK5_FLAJ1
chromate transporter; K07240 chromate transporter
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_35_curated_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10704..11276)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000373E7C6
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ABQ07471.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_solids2_trim150_scaffold_35_curated_10
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11278..12411)
DNA (1134bp) protein (378aa)
Probable membrane fusion efflux lipoprotein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY08_FLAPJ
membrane fusion efflux protein
Hemolysin D {ECO:0000313|EMBL:AKC18150.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
scnpilot_solids2_trim150_scaffold_35_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(12416..13696)
DNA (1281bp) protein (427aa)
Outer membrane efflux protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1G9_9FLAO
heavy metal efflux pump, CzcA family
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_35_curated_12
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13739..16882)
DNA (3144bp) protein (1048aa)
Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY07_FLAPJ
Acriflavine resistance protein B {ECO:0000313|EMBL:AKC16474.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
multidrug resistance protein AcrB/AcrD/AcrF family protein; K07239 heavy-metal exporter, HME family
scnpilot_solids2_trim150_scaffold_35_curated_13
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16984..17373)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003800E07
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07382.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_35_curated_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17523..18884)
DNA (1362bp) protein (454aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Coproporphyrinogen-III oxidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3V9_FLAB3
scnpilot_solids2_trim150_scaffold_35_curated_15
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19017..20462)
DNA (1446bp) protein (482aa)
Putative amino acid-transporting permease n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XAF2_FLACA
putative amino acid-transporting permease; K03294 basic amino acid/polyamine antiporter, APA family
Putative amino acid-transporting permease {ECO:0000313|EMBL:AEW86623.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_solids2_trim150_scaffold_35_curated_16
unknown

Not on your lists

20814..20996
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_35_curated_17
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21152..21694
DNA (543bp) protein (181aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K2P8_9FLAO
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFC21033.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_35_curated_18
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21723..22595
DNA (873bp) protein (291aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
Lipoyl synthase n=3 Tax=Elizabethkingia RepID=H0KNT1_9FLAO
lipoic acid synthetase
scnpilot_solids2_trim150_scaffold_35_curated_19
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22672..23508
DNA (837bp) protein (279aa)
Dienelactone hydrolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1D9_FLAB3
Dienelactone hydrolase {ECO:0000313|EMBL:KIA82996.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Dienelactone hydrolase
scnpilot_solids2_trim150_scaffold_35_curated_20
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23579..24085)
DNA (507bp) protein (169aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W358_9FLAO
General stress protein {ECO:0000313|EMBL:KFC18018.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
General stress protein
scnpilot_solids2_trim150_scaffold_35_curated_21
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24104..24484)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K2Q2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA89008.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_35_curated_22
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24626..25888
DNA (1263bp) protein (421aa)
CinA-like protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1D1_FLAB3
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
scnpilot_solids2_trim150_scaffold_35_curated_23
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25955..28051
DNA (2097bp) protein (699aa)
metallopeptidase; K07386 putative endopeptidase [EC:3.4.24.-]
Peptidase family M13 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8B4_9FLAO
Endothelin-converting protein {ECO:0000313|EMBL:KIC61267.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
scnpilot_solids2_trim150_scaffold_35_curated_24
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28121..29026
DNA (906bp) protein (302aa)
Sulfate-transporting ATPase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHY3_ELIME
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KEY18900.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
multidrug ABC transporter ATPase
scnpilot_solids2_trim150_scaffold_35_curated_25
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29028..31259
DNA (2232bp) protein (744aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000377563B
Uncharacterized protein {ECO:0000313|EMBL:KEY18901.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
thioredoxin family protein
scnpilot_solids2_trim150_scaffold_35_curated_26
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31261..32103
DNA (843bp) protein (281aa)
Esterase/lipase/thioesterase family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L5_FLAB3
Alpha/beta hydrolase {ECO:0000313|EMBL:KIA83008.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
esterase; K06889
scnpilot_solids2_trim150_scaffold_35_curated_27
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32152..32988
DNA (837bp) protein (279aa)
TerC family integral membrane protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L6_FLAB3
TerC family integral membrane protein
TerC family integral membrane protein {ECO:0000313|EMBL:ACU06902.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_35_curated_28
unknown

Not on your lists

33021..33188
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_35_curated_29
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33121..33945)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXL5_9FLAO
Flavin reductase {ECO:0000313|EMBL:KIC64739.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
flavin reductase domain-containing protein fmn-binding protein
scnpilot_solids2_trim150_scaffold_35_curated_30
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33974..35224)
DNA (1251bp) protein (417aa)
Fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2]
Fumarylacetoacetase {ECO:0000313|EMBL:ACU06904.1}; EC=3.7.1.2 {ECO:0000313|EMBL:ACU06904.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Fumarylacetoacetase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L8_FLAB3
Displaying items 1-30 of 181 in total

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