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scnpilot_solids2_trim150_scaffold_2018_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2018_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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50..2077
DNA (2028bp) protein (676aa)
UvrABC system protein B n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER79_AMOA5
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2183..2473
DNA (291bp) protein (97aa)
UPF0235 protein Aasi_0294 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=Y294_AMOA5
hypothetical protein; K09131 hypothetical protein
UPF0235 protein Aasi_0294 {ECO:0000255|HAMAP-Rule:MF_00634}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2739..2966
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER81_AMOA5
hypothetical protein; K06197 cation transport regulator
Uncharacterized protein {ECO:0000313|EMBL:ACE05733.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3907..5202)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER82_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05734.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5318..6487)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER83_AMOA5
hypothetical protein; K03734 thiamine biosynthesis lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:ACE05735.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6658..7686
DNA (1029bp) protein (343aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RUVB_AMOA5
scnpilot_solids2_trim150_scaffold_2018_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7701..8195
DNA (495bp) protein (165aa)
hypothetical protein; K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Dihydrofolate reductase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER85_AMOA5
scnpilot_solids2_trim150_scaffold_2018_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8218..9468
DNA (1251bp) protein (417aa)
CinA-like protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=CINAL_AMOA5
hypothetical protein; K03742 competence/damage-inducible protein CinA
CinA-like protein {ECO:0000255|HAMAP-Rule:MF_00226}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2018_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9944..11038)
DNA (1095bp) protein (365aa)
hypothetical protein; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER87_AMOA5
scnpilot_solids2_trim150_scaffold_2018_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11198..11716)
DNA (519bp) protein (173aa)
hypothetical protein; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER88_AMOA5
Displaying 10 items

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