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scnpilot_solids2_trim150_scaffold_1389_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1389_curated_1
unknown

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comp(2..172)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1389_curated_2
unknown

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comp(159..533)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1389_curated_3
unknown

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comp(539..823)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1389_curated_4
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(1081..2376)
DNA (1296bp) protein (432aa)
Uncharacterized protein (Fragment) n=1 Tax=Strongylocentrotus purpuratus RepID=H3JCG0_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_024242-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
ankyrin repeat protein
scnpilot_solids2_trim150_scaffold_1389_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2505..4253)
DNA (1749bp) protein (583aa)
Aspartate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.12 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartate--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=SYD_AMOA5
scnpilot_solids2_trim150_scaffold_1389_curated_6
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4377..5903)
DNA (1527bp) protein (509aa)
Mur ligase domain protein/alanine racemase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJI0_9BACT
Mur ligase domain protein/alanine racemase {ECO:0000313|EMBL:EAY29283.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
Alanine racemase
scnpilot_solids2_trim150_scaffold_1389_curated_7
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5972..6259)
DNA (288bp) protein (96aa)
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DJN4_9BACT
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage {ECO:0000313|EMBL:EOZ99152.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
septum formation initiator
scnpilot_solids2_trim150_scaffold_1389_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6294..7658)
DNA (1365bp) protein (455aa)
enolase; K01689 enolase [EC:4.2.1.11]
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Enolase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=ENO_AMOA5
scnpilot_solids2_trim150_scaffold_1389_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7851..8966)
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
DNA polymerase III subunit beta n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUH9_AMOA5
scnpilot_solids2_trim150_scaffold_1389_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9260..10810)
DNA (1551bp) protein (517aa)
Rne/Rng family ribonuclease; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI0_AMOA5
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ACE05599.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11265..11552)
DNA (288bp) protein (96aa)
Histone family protein DNA-binding protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI1_AMOA5
histone family DNA-binding protein; K03530 DNA-binding protein HU-beta
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACE05600.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11699..12820
DNA (1122bp) protein (374aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
A/G-specific adenine glycosylase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI2_AMOA5
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACE05601.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12872..13282
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI3_AMOA5
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13784..18265)
DNA (4482bp) protein (1494aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI6_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05605.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


18358..19278
DNA (921bp) protein (307aa)
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagi
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4E0_AMOA5
scnpilot_solids2_trim150_scaffold_1389_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19299..19769
DNA (471bp) protein (157aa)
SsrA-binding protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI8_AMOA5
SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19834..20319
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUI9_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05608.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20421..21059
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ0_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05609.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21590..22633)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4E1_AMOA5
hypothetical protein; K07027
Uncharacterized protein {ECO:0000313|EMBL:ACP20858.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22899..23711
DNA (813bp) protein (271aa)
starch synthase catalytic domain-containing protein; K00703 starch synthase [EC:2.4.1.21]
Starch synthase catalytic domain protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ2_AMOA5
Starch synthase catalytic domain protein {ECO:0000313|EMBL:ACE05611.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23831..24844)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ3_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05612.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1389_curated_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24844..25137)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05613.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 22 items

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