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scnpilot_solids2_trim150_scaffold_2269_curated_18

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 8158..9147

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 2.00e-178
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 8.90e-178
DNA-directed RNA polymerase subunit alpha n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ6_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 329.0
  • Bit_score: 631
  • Evalue 6.30e-178

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGTCATCAATAGCCTTTCAAATACCTGGTAAAATCTCTGTAAAACAAGCAGACGAGTTTCATGGTATATTTACTTTTAAGCCACTTGAAAGAGGTTATGGCGTAACCATTGGTAATGCTTTGAGAAGAGTGATACTATCTTCACTAGAAGGATATGCTATCACCTCTATCAGAATACCCGGCATATATCACGAGTTTTCTACTATAGAGGGGGTAACAGAAGATTTAGTAGAAATTATTTTAAACCTTAAGCAGATTAGGTTTAAAAAAATTGGAGATACTACAGAAAATAAAATATTTATTTCAGTCAACAATAAAAAAATTCTGACAGCAGGAGATTTTGTACAGGCAACTACTGCATTTGAAATAACTAACCCAGAATTAGTTATTTGCCATATAGATGAGTCAGCAAGATTTGAAATAGAAGTTACTGTTGAAAAAGGACGTGGATACGTACCTGCAGAAGAAAATAAAGCTGATGCACAGGTAAAAGGTGTTATACCAATCGATTCTATTTTTACTCCTGTAAAAAATGTTAAATACCATGTAGAGAACACGCGTGTAGGGCAAAAAACGGATTATGAATCTCTAGTATTCTCTGTAGAAACTGATGGTACTATTCACCCTCAAACTGCTATTGAGCGTGCTGCTGATATTATGATCAAGCATTTTACCCTCCTCATTGATAGAAACAAAATGGTAGAGGCTAAAGATGCTGATGAGATAGATGTATTGGATGAGTCTACGCTACAAATGCGTAAACTACTTAAAACTCCTCTTAGTGAAATGGGACTATCTGTTAGAGCATTTAACTGCCTTAAAGCAGCTGACATAAAAACTTTAGGAGATTTAGTACAATTGAAGGTATCTGATATGGCCCAATTTAGAAACTTTGGTAAAAAGTCACTTAAAGAATTACAAGATTTGGTAGCTAGTAAAGATTTAACTTTTGGTATGGACTTATCGGCTTACAATCTAAACGACCAATAA
PROTEIN sequence
Length: 330
MSSIAFQIPGKISVKQADEFHGIFTFKPLERGYGVTIGNALRRVILSSLEGYAITSIRIPGIYHEFSTIEGVTEDLVEIILNLKQIRFKKIGDTTENKIFISVNNKKILTAGDFVQATTAFEITNPELVICHIDESARFEIEVTVEKGRGYVPAEENKADAQVKGVIPIDSIFTPVKNVKYHVENTRVGQKTDYESLVFSVETDGTIHPQTAIERAADIMIKHFTLLIDRNKMVEAKDADEIDVLDESTLQMRKLLKTPLSEMGLSVRAFNCLKAADIKTLGDLVQLKVSDMAQFRNFGKKSLKELQDLVASKDLTFGMDLSAYNLNDQ*