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scnpilot_solids2_trim150_scaffold_2269_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2269_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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56..424
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL14_AMOA5
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


428..775
DNA (348bp) protein (116aa)
50S ribosomal protein L24 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL24_AMOA5
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


768..1313
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUL1_AMOA5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


1327..1596
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS14_AMOA5
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
30S ribosomal protein S14 {ECO:0000255|HAMAP-Rule:MF_00537}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


1686..2087
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS8_AMOA5
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


2106..2660
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL6_AMOA5
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


2688..3038
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4E2_AMOA5
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


3044..3559
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUK6_AMOA5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


3562..3744
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL30_AMOA5
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


3747..4205
DNA (459bp) protein (153aa)
50S ribosomal protein L15 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL15_AMOA5
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


4198..5499
DNA (1302bp) protein (434aa)
Protein translocase subunit SecY n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUK3_AMOA5
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5519..6292
DNA (774bp) protein (258aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Methionine aminopeptidase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUK2_AMOA5
scnpilot_solids2_trim150_scaffold_2269_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6294..6524
DNA (231bp) protein (77aa)
Translation initiation factor IF-1 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUK1_AMOA5
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6539..6655
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL36_AMOA5
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
scnpilot_solids2_trim150_scaffold_2269_curated_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


6658..7038
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS13_AMOA5
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


7190..7480
DNA (291bp) protein (97aa)
30S ribosomal protein S11 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ8_AMOA5
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


7503..8105
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS4_AMOA5
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8158..9147
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUJ6_AMOA5
scnpilot_solids2_trim150_scaffold_2269_curated_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


9220..9804
DNA (585bp) protein (195aa)
50S ribosomal protein L17 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL17_AMOA5
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_2269_curated_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10130..10525
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU80_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05499.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 20 items

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