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scnpilot_solids2_trim150_scaffold_1056_curated_13

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(16663..17526)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 287.0
  • Bit_score: 553
  • Evalue 1.10e-154
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 287.0
  • Bit_score: 553
  • Evalue 3.50e-155
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 287.0
  • Bit_score: 553
  • Evalue 1.60e-154

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAGCTCAAAATAAGTAAGCAGATTACCAACCGCGAAAGCCAATCTTTAGATAAATATCTACAAGAGATTGGACGAGTAGATCTACTTACCCCAGAAGAAGAAGTAGAACTTGCAAAACGCATTAAGTCAGGCGATAAAATTGCATTGGAACAGCTTACCAAAGCTAACTTACGTTTCGTAGTTTCTGTGGCTAAGCAATACCAAAACCAAGGCCTATCGTTGAGCGACCTCATTAATGAGGGGAACTTAGGACTTATTAAATCAGCTCAGCGTTTTGACGAAACACGAGGATTTAAGTTTATTTCCTATGCCGTATGGTGGATTAGGCAGTCTATCTTGCAAGCTTTAGCTGAGCAGTCGCGTATTGTACGTTTACCACTCAACAGAGTAGGTACCCTTAATAAATTATCTAGAACTTTTTCACAGCTTGAACAAAAATATAAACGTGAACCAACTGCTGAAGAGCTGGCAGAAGAGTTAGAGGTTACGCCCGGTGAAATAAGTGATACCATGAAAATATCTGGTCGTCACGTATCAATGGATGCTCCTTTTGTACAAGGCGAAGAGCATAGCTTACTAGACGTATTAGAAGATGACGATGAGGATAAACCTGATGATACGCTTATCGATGAATCTTTGTGCAAAGATATAGAACGTGCTTTATCCTTGCTTACTGAAAGAGAAGCTGGTGTTATCAGTTATTATTTTGGTTTAAAAGGTACTAACCCAATGACCCTAGAAGAAATAGGTACTCGATTTAACCTAACTCGTGAGCGTGTGCGCCAGATTAAGGAAAAGGCCATCAAGAAATTACGTCATATAGGAAGCAGCAAAACGTTAAAAAACTATCTAGGTTAA
PROTEIN sequence
Length: 288
MRQLKISKQITNRESQSLDKYLQEIGRVDLLTPEEEVELAKRIKSGDKIALEQLTKANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKSAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGTLNKLSRTFSQLEQKYKREPTAEELAEELEVTPGEISDTMKISGRHVSMDAPFVQGEEHSLLDVLEDDDEDKPDDTLIDESLCKDIERALSLLTEREAGVISYYFGLKGTNPMTLEEIGTRFNLTRERVRQIKEKAIKKLRHIGSSKTLKNYLG*