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scnpilot_solids2_trim150_scaffold_1056_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1056_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..503)
DNA (501bp) protein (167aa)
queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU64_AMOA5
scnpilot_solids2_trim150_scaffold_1056_curated_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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882..3434
DNA (2553bp) protein (851aa)
Cyclin domain protein F-box protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU63_AMOA5
cyclin domain-containing protein
Cyclin domain protein F-box protein {ECO:0000313|EMBL:ACE05482.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3679..5469)
DNA (1791bp) protein (597aa)
UvrABC system protein C n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU62_AMOA5
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5546..7297)
DNA (1752bp) protein (584aa)
hypothetical protein; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4B9_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACP20836.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7409..8152)
DNA (744bp) protein (248aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU60_AMOA5
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACE05479.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8433..9362)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU59_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05478.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9437..10294)
DNA (858bp) protein (286aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Modification methylase, HemK family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU58_AMOA5
Modification methylase, HemK family {ECO:0000313|EMBL:ACE05477.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10497..11381
DNA (885bp) protein (295aa)
Appr-1-p processing domain protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU57_AMOA5
Appr-1-p processing domain-containing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACE05476.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11961..12671)
DNA (711bp) protein (237aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000255|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000255|HAMAP-Rule:MF_00161}; Short=SPase II {ECO:0000255|HAMAP-Rule:MF_00161};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Lipoprotein signal peptidase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=LSPA_AMOA5
scnpilot_solids2_trim150_scaffold_1056_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12741..13880)
DNA (1140bp) protein (380aa)
aminotransferase class V; K04487 cysteine desulfurase [EC:2.8.1.7]
Aminotransferase class V n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU55_AMOA5
Aminotransferase class V {ECO:0000313|EMBL:ACE05474.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13889..15283)
DNA (1395bp) protein (465aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU54_AMOA5
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ACE05473.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15702..16652)
DNA (951bp) protein (317aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Thioredoxin reductase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU53_AMOA5
scnpilot_solids2_trim150_scaffold_1056_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16663..17526)
DNA (864bp) protein (288aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17636..19774)
DNA (2139bp) protein (713aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=PNP_AMOA5
scnpilot_solids2_trim150_scaffold_1056_curated_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(19961..20236)
DNA (276bp) protein (92aa)
30S ribosomal protein S15 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS15_AMOA5
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1056_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20436..20528)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETY4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06686.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 16 items

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