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scnpilot_solids2_trim150_scaffold_1987_curated_7

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(7147..8553)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 469.0
  • Bit_score: 659
  • Evalue 3.30e-186
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 464.0
  • Bit_score: 537
  • Evalue 5.60e-150
RNA-splicing ligase RtcB n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVA3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 469.0
  • Bit_score: 613
  • Evalue 1.50e-172

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCGTTTAACAGGCAATAATCTTAAAAACATAGGATTCCCAGAGAATAAAGCCATTGGTATAGCACTGACTATCATCGAAAACGAGTGCACTAATCTAACCAAGGATGAACAGCTCGCTTTATTAAGTGATATCCTTAAATTTCCATCTGCTTTTAAAAATAATGAAAAATTTTTGCCCCTTGTTCAGGAATTAGTAATGCCGGTTGATTTTACTATATCCCTGCTTGAAAACCCTCAACCTTACCAAATCTATGGAGCAGGAGGTATTGAAGAAGGTGCATTGAAACAGATGGAGAGAGCCATGCAATTACCGATAGCTATTGCAGGAGCTTTAATGCCCGATGCACACCAAGGGTATGGGCTTCCCATTGGTGGGGTGCTAGCAACACAAAATGCTGTGATACCTTATGGTGTGGGTGTTGATATTGGATGCCGCATGTGTATGACTCTTTATAATCTTCCTACAACTATGCTTGAGGAAAAGAAAGACTTCTTAAAGCAAGTGTTAGTAAACAACACCATGTTTGGACAGGCTACTTTTAAGAAACCAAAAGACCACGAAATCTTTGAGCGAAGTGAGTTTGCAGAGATTAAAATTGCCAAAGAGATGAAAGAACGAGCTACCAAACAAATTGGGTCATCAGGAGGGGGGAATCATTTTGTTGAGTTTGGTATTGTTGATATAGTAAGCCCAGTTAATGAGTTCAACCTTGCTCCAGGCCAATATATTGCAGTACTTTCACACTCAGGATCACGTGGGTTAGGTGCAAGTATTGCAGGTCATTATACCAAAGTTGCGATGGAGGTTTGTAAACTTCCTCAAGAAGCAAAGCATCTTGCATGGCTGGATTTGAACAGTGAAGCCGGACAAGAGTATTGGCTTGCAATGAATCTTGCAGGTGACTATGCATCTGCTTGCCACCACCAGATTCATGAGCGAATTTCCATTGGCTTACAAGAAACTCCAATTGCTATGATTGAGAATCACCACAATTTTGCTTGGAAAGAAAAAGATGCATCTGGCAACGAGATTATTGTTCACCGTAAAGGAGCAACACCTGCTGGCAAAGGTATACTTGGCATCATTCCTGGGTCCATGGCTACCCCGGGTTTTATAATTCGTGGTAAAGGAGTTACCGCCTCAATTAACTCCGCATCGCACGGAGCTGGAAGAACCATGTCACGAACGAAAGCCAAACAAACCATTCTTCCTGGCCATGTGAATAAATTGTTAAAGCAAGCTGGCGTAGAATTAATTGGCTCAGGGCTTGATGAGGCACCCATGGCCTATAAGGATATTCACCAGGTAATGGAATATCAAAAAGATTTAATTGAGATGCTTGGTTCTTTTATGCCAAAGATTGTAAGAATGTGCGGAGATAAAAACTTTCAAGAAGTGGATTGA
PROTEIN sequence
Length: 469
MRLTGNNLKNIGFPENKAIGIALTIIENECTNLTKDEQLALLSDILKFPSAFKNNEKFLPLVQELVMPVDFTISLLENPQPYQIYGAGGIEEGALKQMERAMQLPIAIAGALMPDAHQGYGLPIGGVLATQNAVIPYGVGVDIGCRMCMTLYNLPTTMLEEKKDFLKQVLVNNTMFGQATFKKPKDHEIFERSEFAEIKIAKEMKERATKQIGSSGGGNHFVEFGIVDIVSPVNEFNLAPGQYIAVLSHSGSRGLGASIAGHYTKVAMEVCKLPQEAKHLAWLDLNSEAGQEYWLAMNLAGDYASACHHQIHERISIGLQETPIAMIENHHNFAWKEKDASGNEIIVHRKGATPAGKGILGIIPGSMATPGFIIRGKGVTASINSASHGAGRTMSRTKAKQTILPGHVNKLLKQAGVELIGSGLDEAPMAYKDIHQVMEYQKDLIEMLGSFMPKIVRMCGDKNFQEVD*