ggKbase home page

scnpilot_solids2_trim150_scaffold_1987_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1987_curated_1
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..91
DNA (90bp) protein (30aa)
Transposase n=2 Tax=Rhodocyclaceae RepID=F5RFM5_9RHOO
Transposase {ECO:0000313|EMBL:EGK70639.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
transposase
scnpilot_solids2_trim150_scaffold_1987_curated_2
unknown

Not on your lists

comp(509..3361)
DNA (2853bp) protein (951aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1987_curated_3
Francisella philomiragia, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3495..4061
DNA (567bp) protein (189aa)
Invertase/recombinase like protein n=1 Tax=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) RepID=B0U0D9_FRAP2
invertase/recombinase-like protein
Invertase/recombinase like protein {ECO:0000313|EMBL:ABZ87969.1}; TaxID=484022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella philomiragia subsp. philomiragia (strain ATCC 25017).;"
scnpilot_solids2_trim150_scaffold_1987_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4197..5543)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERA1_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05753.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1987_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5877..6512)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERX4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05976.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_1987_curated_6
unknown

Not on your lists

comp(6905..7027)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1987_curated_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7147..8553)
DNA (1407bp) protein (469aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3]
RNA-splicing ligase RtcB n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVA3_9BACT
scnpilot_solids2_trim150_scaffold_1987_curated_8
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8730..10457
DNA (1728bp) protein (576aa)
Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7MXZ5_9BACT
Phytanoyl-CoA dioxygenase (PhyH) {ECO:0000313|EMBL:EMR01303.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
Phytanoyl-CoA dioxygenase
scnpilot_solids2_trim150_scaffold_1987_curated_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10724..11830)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET16_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06368.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 9 items

View Taxonomy