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scnpilot_solids2_trim150_scaffold_590_curated

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_590_curated_1
unknown

Not on your lists

comp(1..372)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_590_curated_2
unknown

Not on your lists

comp(417..1010)
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_590_curated_3
unknown

Not on your lists

comp(1054..1644)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_590_curated_4
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1644..2699)
DNA (1056bp) protein (352aa)
RHS repeat-associated core domain-containing protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JGH3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KFE98930.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
YD repeat protein
scnpilot_solids2_trim150_scaffold_590_curated_5
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2696..3901)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8X9I3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KJS06383.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_590_curated_6
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3882..5282)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GJ30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KGD69598.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_590_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5858..6112)
DNA (255bp) protein (85aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB9_NIAKG
Excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEV96725.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_590_curated_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6438..8807)
DNA (2370bp) protein (790aa)
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1); K10807 ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II87_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_9
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(8852..9829)
DNA (978bp) protein (326aa)
Ribonucleoside-diphosphate reductase (EC:1.17.4.1); K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II86_FLUTR
Ribonucleoside-diphosphate reductase, beta subunit {ECO:0000313|EMBL:EPB65519.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
scnpilot_solids2_trim150_scaffold_590_curated_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10231..10941
DNA (711bp) protein (237aa)
Phosphoribosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II85_FLUTR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AEA43794.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_590_curated_11
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

10931..11953
DNA (1023bp) protein (341aa)
FAD dependent oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II83_FLUTR
FAD dependent oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_590_curated_12
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11964..13220
DNA (1257bp) protein (419aa)
PAS domain S-box n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TY25_9EURY
PAS domain S-box {ECO:0000313|EMBL:EKQ52596.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_590_curated_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13331..14200)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHF6_FLUTR
hypothetical protein; K08994 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43721.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_590_curated_14
unknown

Not on your lists

14215..14316
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_590_curated_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14413..14646
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ27_FLUTR
acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_590_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14684..15937
DNA (1254bp) protein (418aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ28_FLUTR
scnpilot_solids2_trim150_scaffold_590_curated_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15939..16667
DNA (729bp) protein (243aa)
Ribonuclease 3 (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Ribonuclease 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ29_FLUTR
scnpilot_solids2_trim150_scaffold_590_curated_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16713..17150
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ38_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17153..18571
DNA (1419bp) protein (473aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ39_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18650..21517
DNA (2868bp) protein (956aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037B56D2
Uncharacterized protein {ECO:0000313|EMBL:AKD03542.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_590_curated_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21518..22243)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ14_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22240..23262)
DNA (1023bp) protein (341aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEI48779.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEI48779.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
UDP-glucose 4-epimerase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAR6_RUNSL
scnpilot_solids2_trim150_scaffold_590_curated_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23271..25172)
DNA (1902bp) protein (634aa)
Amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK94_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_24
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25313..29170
DNA (3858bp) protein (1286aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK95_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_25
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29201..29896
DNA (696bp) protein (232aa)
Octanoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
Octanoyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS6_FLUTR
scnpilot_solids2_trim150_scaffold_590_curated_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

29893..31089
DNA (1197bp) protein (399aa)
Beta-lactamase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS5_FLUTR
beta-lactamase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_590_curated_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31086..31496
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS4_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_28
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

31559..32089
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKB0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_590_curated_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32101..32673
DNA (573bp) protein (191aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVW9_LEAB4
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_590_curated_30
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32687..33685
DNA (999bp) protein (333aa)
GTPase Obg n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKB2_FLUTR
GTPase obg; K03979 GTP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 1-30 of 61 in total

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