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scnpilot_solids2_trim150_scaffold_40_curated

Search features with annotation key words

Displaying items 151-180 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_40_curated_151
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(182972..184252)
DNA (1281bp) protein (427aa)
wbpO; UDP-N-acetyl-D-galactosamine dehydrogenase (EC:1.1.1.-); K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7D6_9FLAO
UDP-N-acetyl-D-galactosamine dehydrogenase {ECO:0000313|EMBL:KGO89373.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_solids2_trim150_scaffold_40_curated_152
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(184266..185249)
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase family protein probably involved in polysaccharide biosynthesis (EC:5.1.3.-); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD-dependent epimerase/dehydratase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGL9_9FLAO
Vi polysaccharide biosynthesis protein VipB/TviC {ECO:0000313|EMBL:KGO84284.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_solids2_trim150_scaffold_40_curated_153
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(185341..185916)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003621C5B
UPF0301 protein yqgE
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_154
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(185932..188814)
DNA (2883bp) protein (961aa)
Peptidase m16 domain protein id=3625889 bin=GWF2_Bacteroidetes_35_48 species=Nitritalea halalkaliphila genus=Nitritalea taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
peptidase m16 domain protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_40_curated_155
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(188888..191497)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_156
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

191546..192742
DNA (1197bp) protein (399aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Cell wall hydrolase/autolysin n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_157
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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192833..193870
DNA (1038bp) protein (346aa)
Mammalian cell entry related domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN3_FLUTR
Mammalian cell entry related domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_158
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

193888..195216
DNA (1329bp) protein (443aa)
Iron-sulfur protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN4_FLUTR
iron-sulfur protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_40_curated_159
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

195302..196090
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN5_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_160
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

196101..196556
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45362.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_161
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

196593..197690
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB70_FLUTR
GTP-binding protein YchF; K06942
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_162
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

197773..201084
DNA (3312bp) protein (1104aa)
Protein translocase subunit SecA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIH5_FLUTR
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_163
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

201139..201909
DNA (771bp) protein (257aa)
hypothetical protein AtheD1_06636 id=2717339 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_solids2_trim150_scaffold_40_curated_164
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

201896..202414
DNA (519bp) protein (173aa)
YrbI family 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIH3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_165
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

202404..203216
DNA (813bp) protein (271aa)
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGX5_FLUTR
BadF/BadG/BcrA/BcrD type ATPase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_166
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

203269..203658
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGX6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44757.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_167
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

203675..203920
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGX7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44758.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_168
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

203930..204532
DNA (603bp) protein (201aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGX8_FLUTR
outer membrane chaperone Skp; K06142 outer membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_169
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

204535..205068
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGX9_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_170
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(205117..206985)
DNA (1869bp) protein (623aa)
Tetratricopeptide TPR_2 repeat-containing protein id=3853346 bin=GWF2_Bacteroidetes_38_335 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_40_curated_171
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(206957..207928)
DNA (972bp) protein (324aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
scnpilot_solids2_trim150_scaffold_40_curated_172
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208050..209063
DNA (1014bp) protein (338aa)
fabHA_2; beta-ketoacyl-acyl-carrier-protein synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
Beta-ketoacyl-acyl-carrier-protein synthase III n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JS55_9BACE
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_40_19_curated
scnpilot_solids2_trim150_scaffold_40_curated_173
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

209060..209305
DNA (246bp) protein (82aa)
Acyl carrier protein {ECO:0000313|EMBL:KJS04816.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Putative uncharacterized protein id=3764096 bin=GWF2_Bacteroidetes_38_335 species=Prevotella oulorum genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
acyl carrier protein
scnpilot_solids2_trim150_scaffold_40_curated_174
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

209306..210364
DNA (1059bp) protein (353aa)
Beta-ketoacyl-acyl-carrier-protein synthase I id=4125873 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_40_curated_175
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

210361..211110
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=3764094 bin=GWF2_Bacteroidetes_38_335 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
short-chain dehydrogenase/reductase sdr
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_40_curated_176
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

211085..212023
DNA (939bp) protein (313aa)
Glycosyltransferase id=3960807 bin=GWF2_Bacteroidetes_38_335 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
undecaprenol glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_40_curated_177
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

212020..212640
DNA (621bp) protein (207aa)
UPI000298871B related cluster id=4125868 bin=GWF2_Bacteroidetes_41_31 species=Vibrio parahaemolyticus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_40_curated_178
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(212651..213295)
DNA (645bp) protein (215aa)
Aspartyl/asparaginyl beta-hydroxylase, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CED5_ACAM1
aspH; aspartyl/asparaginyl beta-hydroxylase
Aspartyl/asparaginyl beta-hydroxylase, putative {ECO:0000313|EMBL:ABW25769.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
scnpilot_solids2_trim150_scaffold_40_curated_179
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

comp(213300..214028)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037746D1
Putative uncharacterized protein {ECO:0000313|EMBL:EGD74620.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
aspartyl/asparaginyl beta-hydroxylase
scnpilot_solids2_trim150_scaffold_40_curated_180
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

comp(214025..214783)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UQS1_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD79976.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
aspH; aspartyl/asparaginyl beta-hydroxylase
Displaying items 151-180 of 182 in total

View Taxonomy