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scnpilot_solids2_trim150_scaffold_40_curated

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_40_curated_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

1..2394
DNA (2394bp) protein (798aa)
gliding motility-like protein (EC:3.2.1.-)
CHU large protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SX6_CYTH3
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_40_curated_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2613..3023
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037688D4
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EFK36950.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
transcriptional regulator, badm/rrf2 family
scnpilot_solids2_trim150_scaffold_40_curated_3
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3079..3933
DNA (855bp) protein (285aa)
Male sterility domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7X4_PEDSD
NAD(P)H:quinone oxidoreductase {ECO:0000313|EMBL:CDS95862.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Male sterility domain-containing protein
scnpilot_solids2_trim150_scaffold_40_curated_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4032..4451
DNA (420bp) protein (140aa)
Phenylacetic acid degradation-related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR1_FLUTR
phenylacetic acid degradation-like protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_5
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

4412..5416
DNA (1005bp) protein (335aa)
Chorismate-binding domain-containing protein; K02361 isochorismate synthase [EC:5.4.4.2]
Chorismate binding domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5452..5709)
DNA (258bp) protein (86aa)
Uncharacterized protein id=1852344 bin=GWB2_Ignavibacteria_35_12 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
histone H1-like; K11275 histone H1/5
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_40_curated_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5843..6289
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ9_FLUTR
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA45385.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6291..8711
DNA (2421bp) protein (807aa)
TonB-dependent receptor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBR0_FLUTR
TonB-dependent receptor
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_9
unknown

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comp(8708..8872)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_10
unknown

Not on your lists

comp(9307..10167)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(10200..12830)
DNA (2631bp) protein (877aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC97_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12975..15029)
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE6_FLUTR
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15093..16445)
DNA (1353bp) protein (451aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AEA44632.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AEA44632.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE7_FLUTR
scnpilot_solids2_trim150_scaffold_40_curated_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16522..18477)
DNA (1956bp) protein (652aa)
Glycosyl transferase family 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE8_FLUTR
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA44633.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_15
unknown

Not on your lists

comp(18478..18978)
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18978..19355)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE9_FLUTR
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEA44634.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19482..20048
DNA (567bp) protein (189aa)
trpG; anthranilate synthase component II (glutamine amidotransferase) (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
Anthranilate synthase component II n=1 Tax=Imtechella halotolerans K1 RepID=I0WGZ7_9FLAO
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20110..20550
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFF5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44640.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_40_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20663..22072
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDS7_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_20
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22079..22939
DNA (861bp) protein (287aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAW5_FLUTR
Beta-lactamase {ECO:0000313|EMBL:KJS04177.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
metallo-beta-lactamase superfamily protein
scnpilot_solids2_trim150_scaffold_40_curated_21
unknown

Not on your lists

22982..23389
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23411..23911)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ0_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_23
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(23919..25547)
DNA (1629bp) protein (543aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEP9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_24
unknown

Not on your lists

25658..26110
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_40_curated_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26100..26885
DNA (786bp) protein (262aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

26887..27225
DNA (339bp) protein (113aa)
Translation initiation factor 1 (EIF-1/SUI1) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA81_FLUTR
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_40_curated_27
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27276..28451
DNA (1176bp) protein (392aa)
SAM-dependent methyltransferase (EC:2.1.1.-); K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM-dependent methyltransferase {ECO:0000313|EMBL:AEA45555.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEA45555.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SAM-dependent methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDZ1_FLUTR
scnpilot_solids2_trim150_scaffold_40_curated_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28520..29296)
DNA (777bp) protein (259aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICP9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29301..30698)
DNA (1398bp) protein (466aa)
3-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
3-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICQ0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_40_curated_30
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30691..31743)
DNA (1053bp) protein (351aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICQ1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 1-30 of 182 in total

View Taxonomy