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scnpilot_solids2_trim150_scaffold_2_curated

Search features with annotation key words

Displaying items 1-30 of 477 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2_curated_1
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..992
DNA (990bp) protein (330aa)
Putative uncharacterized protein id=4535051 bin=GWF2_Bacteroidetes_35_48 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_2

Not on your lists

comp(1464..2888)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003826875
Marine sediment metagenome DNA, contig: S01H1_L01319 {ECO:0000313|EMBL:GAF78215.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase S41
scnpilot_solids2_trim150_scaffold_2_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2893..4335)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9T5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43081.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_2_curated_4
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5174..6286
DNA (1113bp) protein (371aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERU7_EMTOG
DEAD/DEAH box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AFK02400.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_2_curated_5
unknown

Not on your lists

6330..6482
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2_curated_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6706..7920)
DNA (1215bp) protein (405aa)
Tetratricopeptide repeat protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVL9_SOLCM
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFD06522.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_2_curated_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7941..10475)
DNA (2535bp) protein (845aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA69_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10712..13237
DNA (2526bp) protein (842aa)
ATPase AAA-2 domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA70_FLUTR
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AEA45247.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
scnpilot_solids2_trim150_scaffold_2_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13401..13715
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9K2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99192.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2_curated_10
unknown

Not on your lists

13660..13851
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14431..15888)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037A9D89
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38291.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_2_curated_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16062..17333)
DNA (1272bp) protein (424aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00639 glycine C-acetyltransferase [EC:2.3.1.29]
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AEA42164.1}; EC=2.3.1.47 {ECO:0000313|EMBL:AEA42164.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
8-amino-7-oxononanoate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBT6_FLUTR
scnpilot_solids2_trim150_scaffold_2_curated_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17494..18903)
DNA (1410bp) protein (470aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AEA46029.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AEA46029.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Phosphoglucosamine mutase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJD2_FLUTR
scnpilot_solids2_trim150_scaffold_2_curated_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19027..20988)
DNA (1962bp) protein (654aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH68_FLUTR
peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEA45882.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_2_curated_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21094..22044)
DNA (951bp) protein (317aa)
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000313|EMBL:AEA45425.1}; EC=1.8.1.9 {ECO:0000313|EMBL:AEA45425.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Thioredoxin reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICF5_FLUTR
scnpilot_solids2_trim150_scaffold_2_curated_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22224..23747
DNA (1524bp) protein (508aa)
Type III restriction protein res subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBR2_FLUTR
type III restriction protein res subunit
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_17
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23761..25095)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J2P1_9SPHI
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:KGE16108.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_2_curated_18
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25105..25782)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVC6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59230.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_2_curated_19
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25823..26341)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RW55_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU18716.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2_curated_20
unknown

Not on your lists

26561..27127
DNA (567bp) protein (189aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2_curated_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27213..30593
DNA (3381bp) protein (1127aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K11942 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG36_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30865..31536)
DNA (672bp) protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:AHM59271.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids2_trim150_scaffold_2_curated_23
unknown

Not on your lists

comp(31554..31973)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2_curated_24
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32087..32635)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2VWA7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD31713.1}; TaxID=641143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_2_curated_25
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32735..35821)
DNA (3087bp) protein (1029aa)
cation transporter n=1 Tax=Empedobacter brevis RepID=UPI000378E52B
Cation transporter {ECO:0000313|EMBL:AIM36414.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids2_trim150_scaffold_2_curated_26
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35826..36917)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000373000B
Cation eflux system protein {ECO:0000313|EMBL:KGE16106.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids2_trim150_scaffold_2_curated_27
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36948..38225)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J987_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59228.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
outer membrane efflux protein
scnpilot_solids2_trim150_scaffold_2_curated_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38315..40798)
DNA (2484bp) protein (828aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG76_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40825..41928)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG77_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_2_curated_30
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42034..43101)
DNA (1068bp) protein (356aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG78_FLUTR
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA44713.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying items 1-30 of 477 in total

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