ggKbase home page

scnpilot_solids2_trim150_scaffold_2652_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2652_curated_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
Acyltransferase 3 n=2 Tax=Oligotropha carboxidovorans RepID=B6JKC1_OLICO
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI08244.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_2652_curated_2
unknown

Not on your lists

comp(388..639)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JKC0_OLICO
hypothetical protein
scnpilot_solids2_trim150_scaffold_2652_curated_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..1456)
DNA (285bp) protein (95aa)
Mercuric transport protein periplasmic component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ6_NITHX
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
mercuric transport protein periplasmic protein; K08364 periplasmic mercuric ion binding protein
scnpilot_solids2_trim150_scaffold_2652_curated_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1468..1845)
DNA (378bp) protein (126aa)
Mercuric ion transport protein, MerT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ5_NITHX
Putative mercuric transport protein {ECO:0000313|EMBL:CEG10185.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
mercuric ion transport protein, MerT; K08363 mercuric ion transport protein
scnpilot_solids2_trim150_scaffold_2652_curated_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1858..2556)
DNA (699bp) protein (233aa)
Cytochrome c biogenesis protein, transmembrane region n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB7_OLICO
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:CEG10186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative cytochrome c biogenesis protein
scnpilot_solids2_trim150_scaffold_2652_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2553..2813)
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ3_NITHX
thioredoxin/glutaredoxin
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ABE65004.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_2652_curated_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3236)
DNA (420bp) protein (140aa)
Transcriptional regulator, MerR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB5_OLICO
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEI08250.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_2652_curated_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..4602)
DNA (1251bp) protein (417aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM
MFS transporter
MFS transporter {ECO:0000313|EMBL:AEI08251.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_2652_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..7057)
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE65007.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
heavy metal translocating P-type ATPase
scnpilot_solids2_trim150_scaffold_2652_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7123..7338)
DNA (216bp) protein (72aa)
Heavy metal transport/detoxification protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI9_NITHX
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABE65008.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_2652_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7785..9065)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WU32_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36511.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
Displaying 11 items

View Taxonomy