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scnpilot_solids2_trim150_scaffold_3955_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3955_curated_1
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..78
DNA (78bp) protein (26aa)
Protein translocase subunit SecE n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQR7_9RHIZ
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
scnpilot_solids2_trim150_scaffold_3955_curated_2
unknown

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629..832
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3955_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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860..1387
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV88_9RHIZ
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG
scnpilot_solids2_trim150_scaffold_3955_curated_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1556..1984
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL11_MESSB
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_3955_curated_5
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1989..2693
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQS0_9RHIZ
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids2_trim150_scaffold_3955_curated_6
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3066..3584
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIA7_9RHIZ
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_solids2_trim150_scaffold_3955_curated_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3639..4016
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Mesorhizobium RepID=F7YDV2_MESOW
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
scnpilot_solids2_trim150_scaffold_3955_curated_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4218..5828
DNA (1611bp) protein (537aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRG4_MESAW
DNA-directed RNA polymerase, beta subunit
Displaying 8 items

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