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scnpilot_solids2_trim150_scaffold_533_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_533_curated_1
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..122
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EQ08_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AID35018.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..856
DNA (612bp) protein (204aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIZ1_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:CCV16400.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_533_curated_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..1847)
DNA (447bp) protein (149aa)
Universal stress protein n=11 Tax=Brucella suis RepID=A9WW65_BRUSI
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1894..2280)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1B5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL02403.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2378..2863)
DNA (486bp) protein (162aa)
Cytochrome B561 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXU8_9RHIZ
Cytochrome B561 {ECO:0000313|EMBL:EXL10617.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome b562; K12262 cytochrome b561
scnpilot_solids2_trim150_scaffold_533_curated_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2937..3539)
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KN0_MESSB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABG62045.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_533_curated_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3586..3981)
DNA (396bp) protein (132aa)
Cytochrome c, class I n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6I9_9RHIZ
Cytochrome c, class I {ECO:0000313|EMBL:EHH12679.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cytochrome c, class I
scnpilot_solids2_trim150_scaffold_533_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4220..5056
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I192_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53254.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_9

Not on your lists

5068..6978
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036245F5
Uncharacterized protein {ECO:0000313|EMBL:KKN86114.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_533_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7014..7463)
DNA (450bp) protein (150aa)
Universal stress protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JE49_OLICO
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
UspA protein
scnpilot_solids2_trim150_scaffold_533_curated_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..7914)
DNA (405bp) protein (135aa)
Putative attachment-related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NK75_9RHIZ
Putative attachment-related protein {ECO:0000313|EMBL:EKF39850.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative attachment-related protein
scnpilot_solids2_trim150_scaffold_533_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8145..8744
DNA (600bp) protein (200aa)
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035F1D69
Putative transmembrane protein {ECO:0000313|EMBL:CDX53603.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8935..11619
DNA (2685bp) protein (895aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6L0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12700.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09181 hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11588..13156)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1A9_9RHIZ
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EZQ13102.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K07028
scnpilot_solids2_trim150_scaffold_533_curated_15
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13216..14052)
DNA (837bp) protein (279aa)
Mlr6594 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988U1_RHILO
Universal stress protein {ECO:0000313|EMBL:EXL02405.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_16
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14139..14591)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GW01_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ02702.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein; K07005
scnpilot_solids2_trim150_scaffold_533_curated_17
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14637..15083)
DNA (447bp) protein (149aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
UPI0003D06ECE related cluster n=1 Tax=unknown RepID=UPI0003D06ECE
Thioredoxin {ECO:0000313|EMBL:ESY91833.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
scnpilot_solids2_trim150_scaffold_533_curated_18
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15076..15585)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000310E220
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_533_curated_19
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15953..16474
DNA (522bp) protein (174aa)
Heat shock protein Hsp20 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G10_MESSB
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABG63665.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_533_curated_20
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16543..16971
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1A2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL01476.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17272..18783
DNA (1512bp) protein (504aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fixL; sensor protein FixL (EC:2.7.13.3)
FixL oxygen regulated histidine kinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6J5_9RHIZ
scnpilot_solids2_trim150_scaffold_533_curated_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18770..19396
DNA (627bp) protein (209aa)
Two-component nitrogen fixation transcriptional regulator FixJ n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6J6_9RHIZ
Response regulator FixJ {ECO:0000313|EMBL:EZQ13590.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fixJ; transcriptional regulatory protein FixJ
scnpilot_solids2_trim150_scaffold_533_curated_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19491..19838
DNA (348bp) protein (116aa)
Putative FixT1 n=1 Tax=uncultured bacterium 1042 RepID=B8R8T5_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EZQ13589.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_533_curated_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19928..20578
DNA (651bp) protein (217aa)
Transcriptional regulator FixK n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1F8_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EXL01472.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
fixK; transcriptional regulator FixK; K15861 CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
scnpilot_solids2_trim150_scaffold_533_curated_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20617..20814
DNA (198bp) protein (66aa)
Msr6604 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988T5_RHILO
hypothetical protein
Msr6604 protein {ECO:0000313|EMBL:BAB52862.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_533_curated_26
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20972..21622
DNA (651bp) protein (217aa)
Transport-associated protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G22_MESSB
transport-associated
Transport-associated protein {ECO:0000313|EMBL:ABG63653.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_533_curated_27
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..22792
DNA (984bp) protein (328aa)
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EFM57413.1}; EC=1.-.-.- {ECO:0000313|EMBL:EFM57413.1};; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase n=2 Tax=Brucella RepID=D1CY27_9RHIZ
scnpilot_solids2_trim150_scaffold_533_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22805..23398)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1F9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53179.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_533_curated_29
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23460..26096)
DNA (2637bp) protein (879aa)
Mg2+ transport ATPase; K01531 Mg2+-importing ATPase [EC:3.6.3.2]
Magnesium transporter n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HC55_9RHIZ
Magnesium transporter {ECO:0000313|EMBL:ESZ54045.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
scnpilot_solids2_trim150_scaffold_533_curated_30
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26114..27049)
DNA (936bp) protein (312aa)
Universal stress protein UspA n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HCK5_9RHIZ
Universal stress protein UspA {ECO:0000313|EMBL:ESZ56200.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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