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scnpilot_solids2_trim150_scaffold_33_curated

Search features with annotation key words

Displaying items 91-120 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_33_curated_91
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99416..100042)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F4A997
Colicin V production protein {ECO:0000313|EMBL:EHK56979.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Colicin V production protein; K03558 membrane protein required for colicin V production
scnpilot_solids2_trim150_scaffold_33_curated_92
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100064..101488)
DNA (1425bp) protein (475aa)
DNA repair protein radA n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984U8_RHILO
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_33_curated_93
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101481..102656)
DNA (1176bp) protein (392aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Alanine racemase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JP2_MESSB
scnpilot_solids2_trim150_scaffold_33_curated_94
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102656..104146)
DNA (1491bp) protein (497aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F9D74D
Replicative DNA helicase {ECO:0000313|EMBL:ESW83056.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
scnpilot_solids2_trim150_scaffold_33_curated_95
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104332..105624)
DNA (1293bp) protein (431aa)
Cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
UPI0003CE8FA3 related cluster n=1 Tax=unknown RepID=UPI0003CE8FA3
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDX19181.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
scnpilot_solids2_trim150_scaffold_33_curated_96
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(105765..106376)
DNA (612bp) protein (204aa)
PREDICTED: 50S ribosomal protein L9, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16E1A
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_33_curated_97
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(106588..106836)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FF528A
rpsR; 30S ribosomal protein18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
scnpilot_solids2_trim150_scaffold_33_curated_98
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(106836..107303)
DNA (468bp) protein (156aa)
UPI0003CE8509 related cluster n=1 Tax=unknown RepID=UPI0003CE8509
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
scnpilot_solids2_trim150_scaffold_33_curated_99
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107657..108820
DNA (1164bp) protein (388aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU09_9RHIZ
Amidohydrolase {ECO:0000313|EMBL:EHK55769.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_100
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108897..109601)
DNA (705bp) protein (235aa)
Aquaporin Z n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y6P0_PARAH
Porin {ECO:0000313|EMBL:EZQ15372.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
aquaporin Z
scnpilot_solids2_trim150_scaffold_33_curated_101
unknown

Not on your lists

comp(109707..110099)
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_102
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110179..111390)
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NQ2_RHILO
scnpilot_solids2_trim150_scaffold_33_curated_103
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111598..112494
DNA (897bp) protein (299aa)
Alpha/beta fold family hydrolase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MPP7_9RHOB
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EFL89007.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
epoxide hydrolase
scnpilot_solids2_trim150_scaffold_33_curated_104
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112514..113425
DNA (912bp) protein (304aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED1C91
TrmH family RNA methyltransferase
scnpilot_solids2_trim150_scaffold_33_curated_105
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113418..114209
DNA (792bp) protein (264aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
UPI0003CF2CCF related cluster n=1 Tax=unknown RepID=UPI0003CF2CCF
glutamate racemase
scnpilot_solids2_trim150_scaffold_33_curated_106
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114273..114464
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Rhizobium leguminosarum RepID=C6B1R4_RHILS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC79744.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
scnpilot_solids2_trim150_scaffold_33_curated_107
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114539..115255
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036AB3D2
Putative uncharacterized protein {ECO:0000313|EMBL:EHP77622.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein; K09990 hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_108
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115296..117608)
DNA (2313bp) protein (771aa)
malic enzyme; K00028 malate dehydrogenase (decarboxylating) [EC:1.1.1.39]
malic enzyme n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030F9A5B
Malic enzyme {ECO:0000313|EMBL:EIM77311.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
scnpilot_solids2_trim150_scaffold_33_curated_109
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117827..118669)
DNA (843bp) protein (281aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY08_9RHIZ
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KFG68516.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
2-keto-4-pentenoate hydratase
scnpilot_solids2_trim150_scaffold_33_curated_110
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118718..119497)
DNA (780bp) protein (260aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I42_MESSB
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG62933.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_111
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119718..120968
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366263A
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK55039.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
scnpilot_solids2_trim150_scaffold_33_curated_112
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120930..121910)
DNA (981bp) protein (327aa)
L-Ala-D/L-Glu epimerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA58_9RHIZ
L-Ala-D/L-Glu epimerase {ECO:0000313|EMBL:CCV14152.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
muconate cycloisomerase
scnpilot_solids2_trim150_scaffold_33_curated_113
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122146..123333
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P5Z6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42751.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein; K02066 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_33_curated_114
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123345..124196
DNA (852bp) protein (284aa)
iron ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037089B2
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ16171.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC transporter; K02065 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_33_curated_115
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124200..125594
DNA (1395bp) protein (465aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQ80_MESAW
ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AGB46253.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_33_curated_116
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125672..126265
DNA (594bp) protein (198aa)
UPI0003CF5250 related cluster n=1 Tax=unknown RepID=UPI0003CF5250
Uncharacterized protein {ECO:0000313|EMBL:CDX26912.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_117
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126581..131728)
DNA (5148bp) protein (1716aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KMA7_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB46256.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_33_curated_118
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132029..132403
DNA (375bp) protein (125aa)
Hpt protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW42_9RHIZ
Hpt protein {ECO:0000313|EMBL:EHK55046.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
HPt domain-containing protein
scnpilot_solids2_trim150_scaffold_33_curated_119
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132545..132865
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW43_9RHIZ
Ferredoxin {ECO:0000313|EMBL:EHK55047.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
scnpilot_solids2_trim150_scaffold_33_curated_120
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132996..134021
DNA (1026bp) protein (342aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
UPI0003CF9E0F related cluster n=1 Tax=unknown RepID=UPI0003CF9E0F
Displaying items 91-120 of 237 in total

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