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scnpilot_solids2_trim150_scaffold_33_curated

Search features with annotation key words

Displaying items 211-237 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_33_curated_211
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229085..230734)
DNA (1650bp) protein (550aa)
thiamine pyrophosphate protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate enzyme-like TPP-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GP5_MESSB
Thiamine pyrophosphate enzyme-like TPP-binding protein {ECO:0000313|EMBL:ABG63430.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_212
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230731..231906)
DNA (1176bp) protein (392aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BZS6_9RHIZ
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EIM75078.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_solids2_trim150_scaffold_33_curated_213
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232007..232939)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037192D0
Lysophospholipase L2 {ECO:0000313|EMBL:EHK55999.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alpha/beta hydrolase fold protein
scnpilot_solids2_trim150_scaffold_33_curated_214
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233167..233529
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370BA8F
Uncharacterized protein {ECO:0000313|EMBL:KIZ39692.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_215
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233590..234735)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKH9_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS50544.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein; K09927 hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_216
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234829..235416)
DNA (588bp) protein (196aa)
sarcosine oxidase subunit gamma family protein; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Sarcosine oxidase subunit gamma family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT25_9RHIZ
Sarcosine oxidase subunit gamma family protein {ECO:0000313|EMBL:EHK56125.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_217
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235409..238399)
DNA (2991bp) protein (997aa)
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:CCV14535.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CCV14535.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Sarcosine oxidase subunit alpha n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDT5_9RHIZ
sarcosine oxidase, alpha subunit family, heterotetrameric form
scnpilot_solids2_trim150_scaffold_33_curated_218
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238396..238698)
DNA (303bp) protein (101aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
sarcosine oxidase subunit delta n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E2161A
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:ESX89033.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
scnpilot_solids2_trim150_scaffold_33_curated_219
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238700..239959)
DNA (1260bp) protein (420aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
Sarcosine oxidase beta subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT22_9RHIZ
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:EHK56122.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_220
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240178..240444
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C358_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX40528.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_221
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240500..241990
DNA (1491bp) protein (497aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
UPI0003D02458 related cluster n=1 Tax=unknown RepID=UPI0003D02458
scnpilot_solids2_trim150_scaffold_33_curated_222
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242063..242512)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D151F
BA14K family protein {ECO:0000313|EMBL:EHK55216.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_33_curated_223
bacterium YEK0313, Bacteria

Not on your lists

242664..243896
DNA (1233bp) protein (411aa)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTR2_9RHIZ
2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:CEJ14852.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
2-oxoisovalerate dehydrogenase subunit alpha
scnpilot_solids2_trim150_scaffold_33_curated_224
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243900..244913
DNA (1014bp) protein (338aa)
bkDa2; 2-oxoisovalerate dehydrogenase beta subunit protein; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase (Beta subunit) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTR3_9RHIZ
2-oxoisovalerate dehydrogenase (Beta subunit) {ECO:0000313|EMBL:EHK55880.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_33_curated_225
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244916..246295
DNA (1380bp) protein (460aa)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex {ECO:0000313|EMBL:CCV10416.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CCV10416.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
branched-chain alpha-keto acid dehydrogenase E2; K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F273_9RHIZ
scnpilot_solids2_trim150_scaffold_33_curated_226
unknown

Not on your lists

246300..246566
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_227
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246563..247969
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTR5_9RHIZ
scnpilot_solids2_trim150_scaffold_33_curated_228
unknown

Not on your lists

248283..249002
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003828CA5
scnpilot_solids2_trim150_scaffold_33_curated_229
unknown

Not on your lists

comp(249046..249213)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_230
unknown

Not on your lists

comp(249413..249784)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_231
unknown

Not on your lists

249922..250143
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_232
unknown

Not on your lists

comp(250203..250373)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_233
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250373..251359)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSC6_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM35619.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
scnpilot_solids2_trim150_scaffold_33_curated_234

Not on your lists

comp(251363..251767)
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM02253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_33_curated_235
unknown

Not on your lists

comp(251755..252243)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_33_curated_236
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252253..252990)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U8F3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EXL10017.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_33_curated_237
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252974..254491)
DNA (1518bp) protein (506aa)
Phage tape measure protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U941_SINMW
phage tape measure protein
Phage tape measure protein {ECO:0000313|EMBL:ABR60171.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying items 211-237 of 237 in total

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