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scnpilot_solids2_trim150_scaffold_112_curated

Search features with annotation key words

Displaying items 151-180 of 245 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_112_curated_151
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161921..162835
DNA (915bp) protein (305aa)
Gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
gluconolactonase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E07621
Gluconolactonase {ECO:0000313|EMBL:KDB01619.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
scnpilot_solids2_trim150_scaffold_112_curated_152
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162857..164224)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EXK4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09822.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
cytochrome P450
scnpilot_solids2_trim150_scaffold_112_curated_153
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164299..164673)
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SHR3_9RHOB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
camphor resistance protein CrcB; K06199 CrcB protein
scnpilot_solids2_trim150_scaffold_112_curated_154
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164995..167442
DNA (2448bp) protein (816aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Nitratireductor indicus C115 RepID=K2N9E6_9RHIZ
scnpilot_solids2_trim150_scaffold_112_curated_155
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(167467..167904)
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000368329B
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_112_curated_156
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168025..169326)
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPR3_9RHIZ
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EIM25955.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_solids2_trim150_scaffold_112_curated_157
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169323..169778)
DNA (456bp) protein (152aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTZ5_9RHIZ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EHK55789.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative TRAP-type C4-dicarboxylate transport system, small permease subunit
scnpilot_solids2_trim150_scaffold_112_curated_158
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169932..170918)
DNA (987bp) protein (329aa)
UPI0003CFA02B related cluster n=1 Tax=unknown RepID=UPI0003CFA02B
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ESZ21504.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
TRAP-type C4-dicarboxylate transport system, periplasmic component
scnpilot_solids2_trim150_scaffold_112_curated_159
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170979..171935)
DNA (957bp) protein (319aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
UPI0003D01CC9 related cluster n=1 Tax=unknown RepID=UPI0003D01CC9
scnpilot_solids2_trim150_scaffold_112_curated_160
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172042..172713
DNA (672bp) protein (224aa)
UPI0003CFD7F8 related cluster n=1 Tax=unknown RepID=UPI0003CFD7F8
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB85193.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
transcriptional regulator, TetR family
scnpilot_solids2_trim150_scaffold_112_curated_161
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173107..176133
DNA (3027bp) protein (1009aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E6B684
DNA polymerase I {ECO:0000313|EMBL:ADV10857.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_112_curated_162
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176333..177124
DNA (792bp) protein (264aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T894_9BRAD
High-affinity branched-chain amino acid transport ATP-binding protein BraF {ECO:0000313|EMBL:GAJ37564.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
high-affinity branched-chain amino acid transport protein, ABC superfamily, ATP-binding
scnpilot_solids2_trim150_scaffold_112_curated_163
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177121..177834
DNA (714bp) protein (238aa)
livF; high-affinity branched-chain amino acid transport protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES16_BRASB
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids2_trim150_scaffold_112_curated_164
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177840..178715
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133F9_RHOPS
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:GAJ37566.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_112_curated_165
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178717..179736
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NQ89_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32542.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_112_curated_166
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179754..180974
DNA (1221bp) protein (407aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DE850
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EJZ35227.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
leucine/isoleucine/valine-binding protein precursor
scnpilot_solids2_trim150_scaffold_112_curated_167
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181299..182138)
DNA (840bp) protein (280aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
PREDICTED: pyrroline-5-carboxylate reductase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C0FD34
scnpilot_solids2_trim150_scaffold_112_curated_168
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182211..182672)
DNA (462bp) protein (154aa)
Hypothetical membrane protein {ECO:0000313|EMBL:CDF83119.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
scnpilot_solids2_trim150_scaffold_112_curated_169
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182763..183386)
DNA (624bp) protein (208aa)
Phospholipase/Carboxylesterase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X482_OCHA4
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABS16036.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_112_curated_170
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183642..184424)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RZ48_9BRAD
NUDIX hydrolase {ECO:0000313|EMBL:ETR75519.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_112_curated_171
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184444..185709)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBG8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT68967.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
acetyl-CoA hydrolase/transferase
scnpilot_solids2_trim150_scaffold_112_curated_172
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185706..186590)
DNA (885bp) protein (295aa)
citryl-CoA lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citryl-CoA lyase n=1 Tax=Frankia sp. CN3 RepID=G6H532_9ACTO
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:KCV64659.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
scnpilot_solids2_trim150_scaffold_112_curated_173
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186587..187585)
DNA (999bp) protein (333aa)
2-nitropropane dioxygenase NPD; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-]
Uncharacterized protein {ECO:0000313|EMBL:ETX05994.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
2-nitropropane dioxygenase NPD id=3964699 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter segnis genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
scnpilot_solids2_trim150_scaffold_112_curated_174
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187600..188361)
DNA (762bp) protein (254aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVK6_PUSST
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEC21212.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_112_curated_175
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188420..189631)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP23_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42579.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_112_curated_176
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189855..191018
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK9_PARL1
Uncharacterized protein {ECO:0000313|EMBL:AJZ63362.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
acyl-CoA dehydrogenase domain-containing protein
scnpilot_solids2_trim150_scaffold_112_curated_177
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191083..192114
DNA (1032bp) protein (344aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNR7_PUSST
TRAP dicarboxylate transporter-DctP subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_solids2_trim150_scaffold_112_curated_178
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192182..193369
DNA (1188bp) protein (396aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SH0_CUPPJ
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AAZ63914.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_solids2_trim150_scaffold_112_curated_179
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193481..194764)
DNA (1284bp) protein (428aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000377EECE
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:ETR78280.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative transmembrane protein
scnpilot_solids2_trim150_scaffold_112_curated_180
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194764..195333)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003691726
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43829.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
tripartite ATP-independent periplasmic transporter DctQ
Displaying items 151-180 of 245 in total

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