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scnpilot_solids2_trim150_scaffold_97_curated

Search features with annotation key words

Displaying items 31-60 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_97_curated_31
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28412..29662
DNA (1251bp) protein (417aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:CDX14453.1}; EC=3.5.3.9 {ECO:0000313|EMBL:CDX14453.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
allantoate amidohydrolase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003723D68
amidase
scnpilot_solids2_trim150_scaffold_97_curated_32
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29709..29924
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTN4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56012.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_97_curated_33
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29924..30271
DNA (348bp) protein (116aa)
pemK; PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-]
PemK-like protein n=4 Tax=Sphingobium RepID=D4Z9E5_SPHJU
Growth inhibitor PemK {ECO:0000313|EMBL:EQB06351.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
scnpilot_solids2_trim150_scaffold_97_curated_34
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30299..31750
DNA (1452bp) protein (484aa)
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2]
D-hydantoinase/dihydropyrimidinase {ECO:0000313|EMBL:CDX59598.1}; EC=3.5.2.2 {ECO:0000313|EMBL:CDX59598.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Dihydropyrimidinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YEP5_MESOW
scnpilot_solids2_trim150_scaffold_97_curated_35
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31823..32245)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI000381B886
Wenxma_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70747.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_36
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32316..33161
DNA (846bp) protein (282aa)
ATP-binding protein of ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTN0_9RHIZ
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:EHK56008.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_97_curated_37
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33340..34215
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHN3_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:ESX69483.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
scnpilot_solids2_trim150_scaffold_97_curated_38
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34215..35336
DNA (1122bp) protein (374aa)
nitrate ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D0EC4
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AID31036.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
scnpilot_solids2_trim150_scaffold_97_curated_39
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35360..36343
DNA (984bp) protein (328aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030AAC21
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09737.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
scnpilot_solids2_trim150_scaffold_97_curated_40
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36489..36932
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6374A
CHRD domain containing protein {ECO:0000313|EMBL:CDX59585.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
CHRD domain containing protein
scnpilot_solids2_trim150_scaffold_97_curated_41
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37067..37660)
DNA (594bp) protein (198aa)
gst2; glutathionine S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Putative glutathionine S-transferase {ECO:0000313|EMBL:CAE26264.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CAE26264.1};; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Putative glutathionine S-transferase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBK8_RHOPA
scnpilot_solids2_trim150_scaffold_97_curated_42
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37864..38136
DNA (273bp) protein (91aa)
Putative regulatory protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FB58_SORC5
regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CAN97979.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_solids2_trim150_scaffold_97_curated_43
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38213..39184)
DNA (972bp) protein (324aa)
Patatin n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y859_9RHIZ
Patatin {ECO:0000313|EMBL:EHH12097.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative esterase of the alpha-beta hydrolase superfamily
scnpilot_solids2_trim150_scaffold_97_curated_44
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39328..39729)
DNA (402bp) protein (134aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
phosphoribosyl-AMP cyclohydrolase; K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase n=3 Tax=Ochrobactrum intermedium RepID=C4WI96_9RHIZ
scnpilot_solids2_trim150_scaffold_97_curated_45
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39775..40410)
DNA (636bp) protein (212aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003CF9D2C related cluster n=1 Tax=unknown RepID=UPI0003CF9D2C
GTP cyclohydrolase I
scnpilot_solids2_trim150_scaffold_97_curated_46
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40633..41079
DNA (447bp) protein (149aa)
Nitrogen-fixing NifU domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y856_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX24523.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
iron-sulfur cluster biosynthesis protein, NifU-like protein
scnpilot_solids2_trim150_scaffold_97_curated_47
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41090..41383
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55002.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
DNA polymerase, beta domain-containing protein region
scnpilot_solids2_trim150_scaffold_97_curated_48
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41380..41751
DNA (372bp) protein (124aa)
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_solids2_trim150_scaffold_97_curated_49
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41741..42070
DNA (330bp) protein (110aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MXB6_9RHIZ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_50
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42212..42388
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VH64_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHK43496.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein; K09946 hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_51
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42584..44590
DNA (2007bp) protein (669aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPV4_9RHIZ
scnpilot_solids2_trim150_scaffold_97_curated_52
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44733..45161
DNA (429bp) protein (143aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PNL2_RHIE6
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ACE89575.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
scnpilot_solids2_trim150_scaffold_97_curated_53
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45205..46089)
DNA (885bp) protein (295aa)
Acid phosphatase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA06_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:AJY46182.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
acid phosphatase
scnpilot_solids2_trim150_scaffold_97_curated_54
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46320..47288)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54998.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_55
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47395..47979
DNA (585bp) protein (195aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVM5_9RHIZ
Nitroreductase {ECO:0000313|EMBL:EHK55242.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitroreductase
scnpilot_solids2_trim150_scaffold_97_curated_56
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47983..48591
DNA (609bp) protein (203aa)
flavin reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003734B31
Flavin reductase domain-containing FMN-binding protein {ECO:0000313|EMBL:EHK55243.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flavin reductase domain-containing FMN-binding protein
scnpilot_solids2_trim150_scaffold_97_curated_57
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48812..49690)
DNA (879bp) protein (293aa)
Citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citrate lyase beta chain n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVM7_9RHIZ
Citryl-CoA lyase {ECO:0000313|EMBL:CDX24562.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_97_curated_58
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49693..50145)
DNA (453bp) protein (151aa)
MaoC-like dehydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2N0L3_9RHIZ
MaoC-like dehydratase {ECO:0000313|EMBL:EKF41043.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
MaoC-like dehydratase
scnpilot_solids2_trim150_scaffold_97_curated_59
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50286..51428
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETG4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX12076.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_60
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51441..52343)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX19127.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative permease
Displaying items 31-60 of 134 in total

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