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scnpilot_solids2_trim150_scaffold_97_curated

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_97_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(848..1081)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3R6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX53620.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1090..1722)
DNA (633bp) protein (211aa)
Nifu protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM0_OLICO
nifu protein
Uncharacterized protein {ECO:0000313|EMBL:EKS30978.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_97_curated_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1854..2387)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05005.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_97_curated_4
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2404..3762)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPB5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KJS10185.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3816..4070)
DNA (255bp) protein (85aa)
Hemerythrin HHE cation binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM3_OLICO
hemerythrin HHE cation binding protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05003.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_97_curated_6
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4321..4587
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369BE8E
Uncharacterized protein {ECO:0000313|EMBL:AKH98808.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
scnpilot_solids2_trim150_scaffold_97_curated_7
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4715..5056
DNA (342bp) protein (114aa)
Ferredoxin-2 n=2 Tax=Bartonella tamiae RepID=J0R023_9RHIZ
Ferredoxin {ECO:0000313|EMBL:KIF43190.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
fdxA; ferredoxin II; K05524 ferredoxin
scnpilot_solids2_trim150_scaffold_97_curated_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5105..5554
DNA (450bp) protein (150aa)
Pseudoazurin n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPN7_9RHIZ
Pseudoazurin {ECO:0000313|EMBL:EKF19282.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
pseudoazurin
scnpilot_solids2_trim150_scaffold_97_curated_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5587..5739)
DNA (153bp) protein (51aa)
Cytochrome oxidase maturation protein Cbb3 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFK4_9RHIZ
Nitrogen fixation protein FixS (Modular protein) {ECO:0000313|EMBL:CDX21345.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cytochrome oxidase maturation protein, cbb3-type
scnpilot_solids2_trim150_scaffold_97_curated_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5736..8051)
DNA (2316bp) protein (772aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Nitrogen fixation protein FixI {ECO:0000313|EMBL:AEI05681.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEI05681.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380B44F
scnpilot_solids2_trim150_scaffold_97_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8048..8902)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E3BAA3
Uncharacterized protein {ECO:0000313|EMBL:EKS36743.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative transmembrane protein
scnpilot_solids2_trim150_scaffold_97_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8919..9101)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8A8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81704.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_solids2_trim150_scaffold_97_curated_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9098..9979)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F1E1B4
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP; K00406 cytochrome c oxidase cbb3-type subunit III
scnpilot_solids2_trim150_scaffold_97_curated_14
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9970..10143)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003760858
cbb3-type cytochrome oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV
Cbb3-type cytochrome oxidase component {ECO:0000313|EMBL:ABG63642.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_97_curated_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10140..10874)
DNA (735bp) protein (245aa)
peptidase S41 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E11059
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:CEG09189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoO2; cbb3-type cytochrome oxidase subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II
scnpilot_solids2_trim150_scaffold_97_curated_16
Sphingomonas sp. NS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10881..12536)
DNA (1656bp) protein (552aa)
Cytochrome c oxidase subunit CcoN {ECO:0000313|EMBL:AJW29229.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AJW29229.1};; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
ccoN2; cbb3-type cytochrome oxidase, subunit CcoN; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000378D77B
scnpilot_solids2_trim150_scaffold_97_curated_17
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13406..15037
DNA (1632bp) protein (544aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
UPI0003CFA226 related cluster n=1 Tax=unknown RepID=UPI0003CFA226
dihydroxy-acid dehydratase
scnpilot_solids2_trim150_scaffold_97_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15024..15827
DNA (804bp) protein (268aa)
Exopolysaccharide production negative regulator n=2 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H4J6_9RHIZ
Exopolysaccharide production negative regulator {ECO:0000313|EMBL:CDX58698.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Sel1 domain-containing protein repeat-containing protein; K07126
scnpilot_solids2_trim150_scaffold_97_curated_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15862..16143)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7D6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF16925.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_97_curated_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16201..16995)
DNA (795bp) protein (265aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
exodeoxyribonuclease III n=1 Tax=Rhizobium loti RepID=UPI00037FE676
Exodeoxyribonuclease III {ECO:0000313|EMBL:AID30549.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_97_curated_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17121..18605
DNA (1485bp) protein (495aa)
PREDICTED: putative purine permease C1399.01c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C13DDB
Permease {ECO:0000313|EMBL:EXL08946.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
uracil-xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
scnpilot_solids2_trim150_scaffold_97_curated_22

Not on your lists

18674..18955
DNA (282bp) protein (94aa)
Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5H6_STAND
Uncharacterized protein {ECO:0000313|EMBL:KKN89047.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CopG/Arc/MetJ family addiction module antidote protein
scnpilot_solids2_trim150_scaffold_97_curated_23
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18952..19257
DNA (306bp) protein (102aa)
Plasmid stabilization system n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5H5_STAND
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ADH88099.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_97_curated_24
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19277..19627)
DNA (351bp) protein (117aa)
PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C176B3
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ABG63209.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_97_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19754..20977
DNA (1224bp) protein (408aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWL8_9RHIZ
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
deoxyguanosinetriphosphate triphosphohydrolase, putative
scnpilot_solids2_trim150_scaffold_97_curated_26
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21051..22808
DNA (1758bp) protein (586aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
UPI0003CE69DD related cluster n=1 Tax=unknown RepID=UPI0003CE69DD
scnpilot_solids2_trim150_scaffold_97_curated_27
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22904..25804
DNA (2901bp) protein (967aa)
sporulation protein n=1 Tax=Rhizobium loti RepID=UPI00036D0EBA
Sporulation domain-containing protein {ECO:0000313|EMBL:CDX44813.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Sporulation domain-containing protein
scnpilot_solids2_trim150_scaffold_97_curated_28
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25896..26528)
DNA (633bp) protein (211aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YER7_9RHIZ
DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway {ECO:0000313|EMBL:CDX29745.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_97_curated_29
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26784..28112
DNA (1329bp) protein (443aa)
Omega amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:EXL01625.1}; EC=2.6.1.18 {ECO:0000313|EMBL:EXL01625.1};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
beta alanine--pyruvate transaminase (EC:2.6.1.18); K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
omega amino acid--pyruvate aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA9674
scnpilot_solids2_trim150_scaffold_97_curated_30
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28165..28407
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRW8_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE44283.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
cupin 2 domain-containing protein
Displaying items 1-30 of 134 in total

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