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scnpilot_solids2_trim150_scaffold_75_curated

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_75_curated_1
unknown

Not on your lists

comp(1272..1442)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_75_curated_2
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2226..3299)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP1_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE36748.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_3
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3333..4139)
DNA (807bp) protein (269aa)
putative enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABE36747.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABE36747.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative enoyl-CoA hydratase/isomerase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP2_BURXL
scnpilot_solids2_trim150_scaffold_75_curated_4
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4108..5802)
DNA (1695bp) protein (565aa)
putative AMP-dependent synthetase and ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Putative AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABE36746.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ABE36746.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative AMP-dependent synthetase and ligase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP3_BURXL
scnpilot_solids2_trim150_scaffold_75_curated_5
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5799..6527)
DNA (729bp) protein (243aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP5_BURXL
branched chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE36744.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_6
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6520..7245)
DNA (726bp) protein (242aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP6_BURXL
branched chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE36743.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_7
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7232..8239)
DNA (1008bp) protein (336aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP7_BURXL
branched chain amino acid ABC transporter inner membrane protein; K01998 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE36742.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8239..9111)
DNA (873bp) protein (291aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP8_BURXL
branched chain amino acid ABC transporter inner membrane protein; K01997 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE36741.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_9
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9155..10369)
DNA (1215bp) protein (405aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GP9_BURXL
branched chain amino acid ABC transporter periplasmic ligand-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE36740.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10765..11604
DNA (840bp) protein (280aa)
Probable transcriptional regulator n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QQK4_BORBO
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:CCN25261.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
scnpilot_solids2_trim150_scaffold_75_curated_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11601..12419
DNA (819bp) protein (273aa)
enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase/isomerase family protein 27 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HMI8_ACHXA
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGY26501.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
scnpilot_solids2_trim150_scaffold_75_curated_12
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12482..13567
DNA (1086bp) protein (362aa)
Putative thiolase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GQ0_BURXL
putative thiolase
Putative thiolase {ECO:0000313|EMBL:ABE36739.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_75_curated_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13567..13986
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HMJ0_ACHXA
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
scnpilot_solids2_trim150_scaffold_75_curated_14
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..14543)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZG4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ02445.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_75_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14543..14956)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQA5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00147.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids2_trim150_scaffold_75_curated_16
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15428..16456
DNA (1029bp) protein (343aa)
UPI0003CF1F1A related cluster n=1 Tax=unknown RepID=UPI0003CF1F1A
Membrane protein {ECO:0000313|EMBL:ESW83995.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
putative permease
scnpilot_solids2_trim150_scaffold_75_curated_17
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..17925
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TJK5_9ENTR
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEP68359.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
solute-binding protein; K10543 D-xylose transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_75_curated_18
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17947..20034
DNA (2088bp) protein (696aa)
Monosaccharide-transporting ATPase n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TNF9_9ENTR
Inner-membrane translocator {ECO:0000313|EMBL:KFE36410.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
inner-membrane translocator; K10544 D-xylose transport system permease protein
scnpilot_solids2_trim150_scaffold_75_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20250..20612)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNM2_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EHK57675.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
response regulator receiver protein; K13589 two-component system, cell cycle response regulator CpdR
scnpilot_solids2_trim150_scaffold_75_curated_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20822..21712
DNA (891bp) protein (297aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhizobium loti RepID=UPI00036CC1BD
N-formylglutamate amidohydrolase family protein {ECO:0000313|EMBL:AID32354.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
N-formylglutamate amidohydrolase
scnpilot_solids2_trim150_scaffold_75_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21955..22728
DNA (774bp) protein (258aa)
inositol monophosphatase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000309EC29
Histidinol-phosphate phosphatase {ECO:0000313|EMBL:EHK57677.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
histidinol-phosphate phosphatase
scnpilot_solids2_trim150_scaffold_75_curated_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22752..23747)
DNA (996bp) protein (332aa)
Lysophospholipase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ37_MESAW
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:AGB44379.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_75_curated_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24164..24634
DNA (471bp) protein (157aa)
Small heat shock protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H48_RHILO
small heat shock protein; K04080 molecular chaperone IbpA
Small heat shock protein {ECO:0000313|EMBL:BAB50018.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_75_curated_24
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24716..25765)
DNA (1050bp) protein (350aa)
threonine aldolase, low-specificity; K01620 threonine aldolase [EC:4.1.2.5]
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
Threonine aldolase, low-specificity n=22 Tax=Brucella RepID=C7LGQ7_BRUMC
scnpilot_solids2_trim150_scaffold_75_curated_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26164..30882
DNA (4719bp) protein (1573aa)
Glutamate synthase, large subunit {ECO:0000313|EMBL:CDX54985.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CDX54985.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glutamate synthase; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FB5D0B
scnpilot_solids2_trim150_scaffold_75_curated_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31052..32506
DNA (1455bp) protein (485aa)
Glutamate synthase subunit beta {ECO:0000313|EMBL:EKF17005.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EKF17005.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
gltD; glutamate synthase subunit beta; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase subunit beta n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7L1_9RHIZ
scnpilot_solids2_trim150_scaffold_75_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32527..33519)
DNA (993bp) protein (331aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZN7_9RHIZ
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EHK53844.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_75_curated_28
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33652..34650)
DNA (999bp) protein (333aa)
glycerol-3-phosphate ABC transporter ATPase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FF8DE
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ABG64087.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_75_curated_29
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34666..35733)
DNA (1068bp) protein (356aa)
oxidoreductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000368C0AB
oxidoreductase-like
Oxidoreductase-like protein {ECO:0000313|EMBL:ABG64086.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_75_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35730..36569)
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ64_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK59227.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
Displaying items 1-30 of 125 in total

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