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scnpilot_solids2_trim150_scaffold_73_curated

Search features with annotation key words

Displaying items 31-60 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_73_curated_31
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31262..32137
DNA (876bp) protein (292aa)
Putative Branched-chain amino acid ABC transporter (Permease protein) livH-like protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T774_9BRAD
Putative Branched-chain amino acid ABC transporter (Permease protein) livH-like protein {ECO:0000313|EMBL:CCE02301.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_73_curated_32
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32147..33076
DNA (930bp) protein (310aa)
Inner-membrane translocator n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9J0_RHOPT
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ACF00462.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids2_trim150_scaffold_73_curated_33
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33073..34545
DNA (1473bp) protein (491aa)
ABC transporter related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IU72_METNO
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACL55117.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_73_curated_34
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34558..35091)
DNA (534bp) protein (178aa)
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:ABG64602.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Inorganic pyrophosphatase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DC3_MESSB
scnpilot_solids2_trim150_scaffold_73_curated_35
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35177..35683)
DNA (507bp) protein (169aa)
UPI0003D03297 related cluster n=1 Tax=unknown RepID=UPI0003D03297
GCN5 family acetyltransferase {ECO:0000313|EMBL:EXL05940.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
GCN5-like N-acetyltransferase
scnpilot_solids2_trim150_scaffold_73_curated_36
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35788..36411)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y709_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12468.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K08988 putative membrane protein
scnpilot_solids2_trim150_scaffold_73_curated_37
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36427..37284)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQQ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14312.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K06872 uncharacterized protein
scnpilot_solids2_trim150_scaffold_73_curated_38
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37304..37936)
DNA (633bp) protein (211aa)
LemA family lipoprotein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E16DB2
Uncharacterized protein {ECO:0000313|EMBL:EKF41832.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein; K03744 LemA protein
scnpilot_solids2_trim150_scaffold_73_curated_39
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38070..38318
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI000372DDF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESX67209.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
scnpilot_solids2_trim150_scaffold_73_curated_40
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38326..39210
DNA (885bp) protein (295aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
pyridoxal kinase (EC:2.7.1.35); K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxamine kinase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF51_9RHIZ
scnpilot_solids2_trim150_scaffold_73_curated_41
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39332..39769
DNA (438bp) protein (146aa)
ornithine cyclodeaminase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000308F799
Peroxiredoxin {ECO:0000313|EMBL:EXL10312.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
OsmC subfamily peroxiredoxin; K04063 osmotically inducible protein OsmC
scnpilot_solids2_trim150_scaffold_73_curated_42
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39826..40440)
DNA (615bp) protein (205aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
msrA2; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA6_9RHIZ
scnpilot_solids2_trim150_scaffold_73_curated_43
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40549..40638)
DNA (90bp) protein (30aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:EHK58501.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EHK58501.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sdhB; succinate dehydrogenase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA1_9RHIZ
scnpilot_solids2_trim150_scaffold_73_curated_44
unknown

Not on your lists

comp(40702..41481)
DNA (780bp) protein (260aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_73_curated_45
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41529..43373)
DNA (1845bp) protein (615aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
succinate dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI0003715D6D
succinate dehydrogenase, flavoprotein subunit
scnpilot_solids2_trim150_scaffold_73_curated_46
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43383..43766)
DNA (384bp) protein (128aa)
UPI0003D059EE related cluster n=1 Tax=unknown RepID=UPI0003D059EE
Succinate dehydrogenase {ECO:0000313|EMBL:ESZ26231.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
succinate dehydrogenase cytochrome b small subunit; K00242 succinate dehydrogenase membrane anchor subunit
scnpilot_solids2_trim150_scaffold_73_curated_47
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43768..44175)
DNA (408bp) protein (136aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2NZN8_9RHIZ
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EKF40526.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
scnpilot_solids2_trim150_scaffold_73_curated_48
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44451..44894)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FDA691
Uncharacterized protein {ECO:0000313|EMBL:EKF40525.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_49
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45115..45483
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZ35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40523.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_50
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45503..46894)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F2F8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX41949.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
diguanylate cyclase
scnpilot_solids2_trim150_scaffold_73_curated_51
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46982..48262
DNA (1281bp) protein (427aa)
Filament-A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLP9_9RHIZ
Filament-A {ECO:0000313|EMBL:EHK58307.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptidase M23
scnpilot_solids2_trim150_scaffold_73_curated_52
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48252..49583
DNA (1332bp) protein (444aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGI5_9RHIZ
Carboxyl-terminal protease {ECO:0000313|EMBL:EHH09123.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_73_curated_53
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49719..50888
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGI6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09124.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09798 hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_54
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50888..51418
DNA (531bp) protein (177aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
UPI0003CE92E3 related cluster n=2 Tax=unknown RepID=UPI0003CE92E3
scnpilot_solids2_trim150_scaffold_73_curated_55
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51445..52110)
DNA (666bp) protein (222aa)
UPI0003CFF0F5 related cluster n=1 Tax=unknown RepID=UPI0003CFF0F5
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
heme exporter protein CcmB; K02194 heme exporter protein B
scnpilot_solids2_trim150_scaffold_73_curated_56
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52104..52733)
DNA (630bp) protein (210aa)
heme exporter protein CcmA (EC:3.6.3.41); K02193 heme exporter protein A [EC:3.6.3.41]
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
UPI0003CE9EE9 related cluster n=1 Tax=unknown RepID=UPI0003CE9EE9
scnpilot_solids2_trim150_scaffold_73_curated_57
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53011..55701
DNA (2691bp) protein (897aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3]
aconitate hydratase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FC3B00
scnpilot_solids2_trim150_scaffold_73_curated_58
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55836..56585
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D99D2
Uncharacterized protein {ECO:0000313|EMBL:ESZ62396.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_73_curated_59
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56945..57943
DNA (999bp) protein (333aa)
UPI0003CEDBAA related cluster n=1 Tax=unknown RepID=UPI0003CEDBAA
Carbapenem-hydrolyzing beta-lactamase transcriptional activator {ECO:0000313|EMBL:CDX24348.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_73_curated_60
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58002..59558
DNA (1557bp) protein (519aa)
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Trimethylamine methyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y2I7_MESOW
Trimethylamine methyltransferase {ECO:0000313|EMBL:ESZ62684.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
Displaying items 31-60 of 163 in total

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