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scnpilot_solids2_trim150_scaffold_1096_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1096_curated_1
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1210)
DNA (1209bp) protein (403aa)
Peptidase S10 serine carboxypeptidase n=1 Tax=Burkholderia sp. RPE64 RepID=R4WKB1_9BURK
Serine carboxypeptidase family protein {ECO:0000313|EMBL:AJX12566.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
peptidase S10 serine carboxypeptidase
scnpilot_solids2_trim150_scaffold_1096_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2021..2485
DNA (465bp) protein (155aa)
UPI0003D03FB2 related cluster n=1 Tax=unknown RepID=UPI0003D03FB2
MucR family transcriptional regulator {ECO:0000313|EMBL:ESZ11054.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulatory protein
scnpilot_solids2_trim150_scaffold_1096_curated_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2854..3069)
DNA (216bp) protein (72aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhizobium sp. CF142 RepID=J2AXW7_9RHIZ
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJJ28365.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
glyoxalase/bleomycin resistance-like protein
scnpilot_solids2_trim150_scaffold_1096_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3083..4282)
DNA (1200bp) protein (400aa)
Chromate transporter n=1 Tax=Octadecabacter arcticus 238 RepID=M9RPU6_9RHOB
Chromate transport protein {ECO:0000313|EMBL:CDN96519.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
chromate transporter
scnpilot_solids2_trim150_scaffold_1096_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4279..4581)
DNA (303bp) protein (101aa)
Transcriptional regulator, PadR-like family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJJ5_METNO
Transcriptional regulator, Acidobacterial, PadR-family {ECO:0000313|EMBL:CDN96520.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
transcriptional regulator, PadR-like family
scnpilot_solids2_trim150_scaffold_1096_curated_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4718..4927
DNA (210bp) protein (70aa)
UPI0003CE4FB5 related cluster n=1 Tax=unknown RepID=UPI0003CE4FB5
Uncharacterized protein {ECO:0000313|EMBL:KKB07186.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1096_curated_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5077..6102)
DNA (1026bp) protein (342aa)
UPI0003CF69A7 related cluster n=1 Tax=unknown RepID=UPI0003CF69A7
Cation transporter {ECO:0000313|EMBL:ESW82975.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transmembrane efflux protein
scnpilot_solids2_trim150_scaffold_1096_curated_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6392)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDA4_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL61270.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_1096_curated_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6517..7317)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11IX1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG62654.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1096_curated_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..7602
DNA (243bp) protein (81aa)
UPI0003D0087B related cluster n=1 Tax=unknown RepID=UPI0003D0087B
Uncharacterized protein {ECO:0000313|EMBL:ESZ26915.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
cytochrome B561
scnpilot_solids2_trim150_scaffold_1096_curated_11
unknown

Not on your lists

comp(7606..7812)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1096_curated_12
unknown

Not on your lists

comp(7823..8092)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1096_curated_13
unknown

Not on your lists

comp(8150..8254)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1096_curated_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..9167
DNA (741bp) protein (247aa)
Cytochrome c-type biogenesis protein CcdA (DsbD-like protein) n=1 Tax=Nitratireductor indicus C115 RepID=K2PGK2_9RHIZ
Cytochrome c-type biogenesis protein CcdA (DsbD-like protein) {ECO:0000313|EMBL:EKF40192.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
cytochrome c-type biogenesis protein CcdA (DsbD-like protein); K06196 cytochrome c-type biogenesis protein
scnpilot_solids2_trim150_scaffold_1096_curated_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9261..9869)
DNA (609bp) protein (203aa)
Electron transport protein SCO1/SenC n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3V9_OCHA4
electron transport protein SCO1/SenC; K07152
Copper-binding protein {ECO:0000313|EMBL:KGJ12645.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
scnpilot_solids2_trim150_scaffold_1096_curated_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..10354)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MYC6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40243.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein; K09796 hypothetical protein
scnpilot_solids2_trim150_scaffold_1096_curated_17
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10371..12500)
DNA (2130bp) protein (710aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K302_9RHIZ
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ELT51244.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
scnpilot_solids2_trim150_scaffold_1096_curated_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12567..12986
DNA (420bp) protein (140aa)
MerR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F652
MerR family transcriptional regulator {ECO:0000313|EMBL:EKF40238.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
MerR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1096_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13124..13504
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KC1_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KFC75964.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1096_curated_20
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13890..14765)
DNA (876bp) protein (292aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAS9_STAND
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADH90946.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_1096_curated_21
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14762..15238)
DNA (477bp) protein (159aa)
Activator of Hsp90 ATPase 1 family protein id=2996868 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
activator of Hsp90 ATPase 1 family protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_solids2_trim150_scaffold_1096_curated_22
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15235..15576)
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1C5_PARDP
regulatory protein ArsR
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABL69319.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_solids2_trim150_scaffold_1096_curated_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15821..16273)
DNA (453bp) protein (151aa)
Cytochrome c, class II n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MI3_MESSB
cytochrome c, class II
Cytochrome c, class II {ECO:0000313|EMBL:ABG61386.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1096_curated_24
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16306..17517)
DNA (1212bp) protein (404aa)
Putative metal cation transporter n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MI2_MESSB
putative metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:ABG61387.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1096_curated_25
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17514..18647)
DNA (1134bp) protein (378aa)
Multicopper oxidase, type 3 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MI1_MESSB
multicopper oxidase, type 3
Multicopper oxidase, type 3 {ECO:0000313|EMBL:ABG61388.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1096_curated_26
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18846..19322
DNA (477bp) protein (159aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MI0_MESSB
manganese transport regulator MntR; K11924 DtxR family transcriptional regulator, manganese transport regulator
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ABG61389.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_1096_curated_27
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19435..19824)
DNA (390bp) protein (130aa)
Mercuric reductase (Hg(II) reductase) {ECO:0000313|EMBL:CCF22080.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CCF22080.1};; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
merA; putative MerA, mercuric ion reductase; K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase (Hg(II) reductase) n=1 Tax=Rhizobium sp. RepID=L0NLY6_RHISP
Displaying 27 items

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