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scnpilot_solids2_trim150_scaffold_2443_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2443_curated_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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133..276
DNA (144bp) protein (48aa)
Transposase IS110 n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FSC2_9RHIZ
Transposase {ECO:0000313|EMBL:KFL27931.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transposase IS116/IS110/IS902 family protein
scnpilot_solids2_trim150_scaffold_2443_curated_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(425..3064)
DNA (2640bp) protein (880aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P39_RHILO
ATP-dependent DNA ligase {ECO:0000313|EMBL:BAB54816.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_2443_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3187..3645)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRE9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32947.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2443_curated_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3721..4209)
DNA (489bp) protein (163aa)
Small heat shock protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P38_RHILO
small heat shock protein
Small heat shock protein {ECO:0000313|EMBL:BAB54817.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_2443_curated_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4392..5024)
DNA (633bp) protein (211aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CHJ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAO39212.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
CRP/FNR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2443_curated_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5064..5861)
DNA (798bp) protein (266aa)
Crp-like helix-turn-helix domain containing protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YC29_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAO39212.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
regulatory protein Crp
scnpilot_solids2_trim150_scaffold_2443_curated_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6021..6722)
DNA (702bp) protein (234aa)
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Anaerobic regulatory protein {ECO:0000313|EMBL:CEG07033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
scnpilot_solids2_trim150_scaffold_2443_curated_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6806..7465
DNA (660bp) protein (220aa)
alternative oxidase 1 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B628DB
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
scnpilot_solids2_trim150_scaffold_2443_curated_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7601..8719
DNA (1119bp) protein (373aa)
nitrite reductase, copper-containing; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
nitrite reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F886F
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:ABG61243.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_2443_curated_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8776..9633
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11NC6_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61242.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 10 items

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