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scnpilot_solids2_trim150_scaffold_242_curated

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_242_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..811
DNA (810bp) protein (270aa)
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPN2_9RHIZ
Short chain dehydrogenase {ECO:0000313|EMBL:EHK57325.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
short-chain dehydrogenase/reductase SDR; K13775 citronellol/citronellal dehydrogenase
scnpilot_solids2_trim150_scaffold_242_curated_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1041..3212)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Rhizobium loti RepID=M5B2U7_RHILI
Uncharacterized protein {ECO:0000313|EMBL:BAN10186.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
OmpA/MotB domain-containing protein
scnpilot_solids2_trim150_scaffold_242_curated_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3399..3845
DNA (447bp) protein (149aa)
UPI0003CF5D17 related cluster n=1 Tax=unknown RepID=UPI0003CF5D17
UPF0260 protein X772_22535 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_4
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3979..4323
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YH14_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KFB09638.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..5128)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJQ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17984.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein; K09807 hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5369..6928
DNA (1560bp) protein (520aa)
glyoxalase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AB297D
Phospholipase {ECO:0000313|EMBL:EZQ16907.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6921..7244
DNA (324bp) protein (108aa)
acetyltransferase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FDDBB
Acetyltransferase {ECO:0000313|EMBL:EZQ16908.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7412..8359)
DNA (948bp) protein (316aa)
glyoxalase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037A3BE3
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJM99300.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_9
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..9409
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E62D70
LysR family transcriptional regulator {ECO:0000313|EMBL:KGJ04343.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
transcriptional regulator, LysR family
scnpilot_solids2_trim150_scaffold_242_curated_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9466..9846)
DNA (381bp) protein (127aa)
Cytochrome c-550 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD85_9RHIZ
Cytochrome c-550 {ECO:0000313|EMBL:CCV14311.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
cytochrome C; K08738 cytochrome c
scnpilot_solids2_trim150_scaffold_242_curated_11
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9837..10451)
DNA (615bp) protein (205aa)
Membrane protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL47_RUEPO
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids2_trim150_scaffold_242_curated_12
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10448..11050)
DNA (603bp) protein (201aa)
SCO1/SenC family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL46_RUEPO
SCO1/SenC family protein; K07152
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids2_trim150_scaffold_242_curated_13
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11055..12506)
DNA (1452bp) protein (484aa)
UPI0003D6B87B related cluster n=1 Tax=unknown RepID=UPI0003D6B87B
cytochrome c oxidase subunit 1
Tax=BJP_08E140C01_Roseovarius_63_250
scnpilot_solids2_trim150_scaffold_242_curated_14
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12517..13014)
DNA (498bp) protein (166aa)
cytochrome c oxidase,ba3-type, subunit I; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase,ba3-type, subunit I, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL44_RUEPO
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids2_trim150_scaffold_242_curated_15
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13140..13586
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00036E75DD
Rrf2 family protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids2_trim150_scaffold_242_curated_16
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13791..14102
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C309_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76211.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_17
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14234..15028
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
thyA; thymidylate synthase (EC:1.1.1.213); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=2 Tax=Ochrobactrum intermedium RepID=C4WF15_9RHIZ
scnpilot_solids2_trim150_scaffold_242_curated_18

Not on your lists

15054..15587
DNA (534bp) protein (178aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Diacylglycerol kinase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEC0_9RHIZ
scnpilot_solids2_trim150_scaffold_242_curated_19
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15735..16868
DNA (1134bp) protein (378aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
UPI0003D05D87 related cluster n=1 Tax=unknown RepID=UPI0003D05D87
Uncharacterized protein {ECO:0000313|EMBL:ESZ42353.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
scnpilot_solids2_trim150_scaffold_242_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16865..17836
DNA (972bp) protein (324aa)
Protein HflC n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTC2_9RHIZ
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
membrane protease subunit, stomatin/prohibitin
scnpilot_solids2_trim150_scaffold_242_curated_21
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17850..18035
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YH37_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX38766.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K09937 hypothetical protein
scnpilot_solids2_trim150_scaffold_242_curated_22
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18161..19684
DNA (1524bp) protein (508aa)
serine protease; K01362 [EC:3.4.21.-]
serine protease n=1 Tax=Rhizobium loti RepID=UPI00036F8229
Protease Do family protein {ECO:0000313|EMBL:AID30894.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_242_curated_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19696..20262)
DNA (567bp) protein (189aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TG81_MESCW
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADV12351.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_242_curated_24
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20259..21140)
DNA (882bp) protein (294aa)
phosphoserine phosphatase; K01079 phosphoserine phosphatase [EC:3.1.3.3]
phosphoserine phosphatase n=1 Tax=Rhizobium loti RepID=UPI00036194A7
Phosphoserine phosphatase {ECO:0000313|EMBL:ESX60847.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
scnpilot_solids2_trim150_scaffold_242_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21153..22031
DNA (879bp) protein (293aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2
tRNA dimethylallyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTB6_9RHIZ
tRNA isopentenyltransferase MiaA
scnpilot_solids2_trim150_scaffold_242_curated_26
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22167..22958
DNA (792bp) protein (264aa)
Mll1446 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KJ5_RHILO
hypothetical protein
Mll1446 protein {ECO:0000313|EMBL:BAB48819.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_242_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23123..24952)
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTB4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56055.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K06915
scnpilot_solids2_trim150_scaffold_242_curated_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25347..27134
DNA (1788bp) protein (596aa)
acetolactate synthase 3 catalytic subunit (EC:1.2.2.2); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Acetolactate synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KK6_RHILO
scnpilot_solids2_trim150_scaffold_242_curated_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27196..27477
DNA (282bp) protein (94aa)
Transcription regulator SpoVT/AbrB family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTA9_9RHIZ
Transcription regulator SpoVT/AbrB family protein {ECO:0000313|EMBL:EHK56050.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AbrB family transcriptional regulator
scnpilot_solids2_trim150_scaffold_242_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27461..27868
DNA (408bp) protein (136aa)
PilT-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTA8_9RHIZ
PilT-like protein {ECO:0000313|EMBL:EHK56049.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative nucleic-acid-binding protein, contains PIN domain
Displaying items 1-30 of 68 in total

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