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scnpilot_solids2_trim150_scaffold_5_curated

Search features with annotation key words

Displaying items 151-180 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5_curated_151
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156847..157398
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
20S proteasome subunits A and B; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDA7_9RHIZ
scnpilot_solids2_trim150_scaffold_5_curated_152
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157395..157991
DNA (597bp) protein (199aa)
UPF0314 protein Mesau_00618 n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDM2_MESAW
Protein of unknown function (DUF2585)
UPF0314 protein Mesau_00618 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_5_curated_153
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157996..159303
DNA (1308bp) protein (436aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7A4_9RHIZ
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
heat shock protein HslVU, ATPase subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
scnpilot_solids2_trim150_scaffold_5_curated_154
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159370..160365
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003159C25
Protein of unknown function (DUF1402)
Uncharacterized protein {ECO:0000313|EMBL:ESY93347.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_solids2_trim150_scaffold_5_curated_155
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160374..160610)
DNA (237bp) protein (79aa)
AsnC family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSB5_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHK56325.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AsnC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_156
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160871..162718
DNA (1848bp) protein (616aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Xanthobacteraceae RepID=UPI0003664E09
scnpilot_solids2_trim150_scaffold_5_curated_157
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163089..163874)
DNA (786bp) protein (262aa)
Cyclase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JI03_AGRRK
Cyclase {ECO:0000313|EMBL:ETR76546.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
cyclase
scnpilot_solids2_trim150_scaffold_5_curated_158
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163901..164884)
DNA (984bp) protein (328aa)
fumarylacetoacetate hydrolase family protein (EC:3.-.-.-); K01567 [EC:3.-.-.-]
Putative Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:ABQ37919.1}; EC=3.-.-.- {ECO:0000313|EMBL:ABQ37919.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative Fumarylacetoacetate hydrolase family protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP25_BRASB
scnpilot_solids2_trim150_scaffold_5_curated_159
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164975..165922
DNA (948bp) protein (316aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z581_9BRAD
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76544.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_solids2_trim150_scaffold_5_curated_160
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165919..166620
DNA (702bp) protein (234aa)
Putative transcriptional regulatory protein, GntR family n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5I4_9BRAD
putative transcriptional regulatory protein, GntR family
Putative transcriptional regulatory protein, GntR family {ECO:0000313|EMBL:BAM88216.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
scnpilot_solids2_trim150_scaffold_5_curated_161
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166607..167419
DNA (813bp) protein (271aa)
atsC; ABC transporter ATP-binding protein (EC:3.6.3.-); K01552 [EC:3.6.3.-]
Putative ABC transporter (ATP binding protein) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ50_BRASO
ABC transporter {ECO:0000313|EMBL:KFI29941.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
scnpilot_solids2_trim150_scaffold_5_curated_162
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167416..168177
DNA (762bp) protein (254aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP29_BRASB
ABC transporter permease {ECO:0000313|EMBL:ETR76541.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease
scnpilot_solids2_trim150_scaffold_5_curated_163
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168174..168941
DNA (768bp) protein (256aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T518_9BRAD
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:CCE01545.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
ABC transporter permease
scnpilot_solids2_trim150_scaffold_5_curated_164
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168961..170409)
DNA (1449bp) protein (483aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003816CCC
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:GAK72988.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
scnpilot_solids2_trim150_scaffold_5_curated_165
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170413..171180)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D945FF
Uncharacterized protein {ECO:0000313|EMBL:GAK72987.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_166
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171217..171966)
DNA (750bp) protein (250aa)
purine or other phosphorylase family 1; K00757 uridine phosphorylase [EC:2.4.2.3]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E2E0C8
Uridine phosphorylase {ECO:0000313|EMBL:GAK72986.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
scnpilot_solids2_trim150_scaffold_5_curated_167
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171963..172844)
DNA (882bp) protein (294aa)
rbsK; ribokinase; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F7D949
Uncharacterized protein {ECO:0000313|EMBL:GAK72985.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
scnpilot_solids2_trim150_scaffold_5_curated_168
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172841..173404)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E936E1
Isochorismatase family protein {ECO:0000313|EMBL:GAK72984.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
isochorismatase hydrolase
scnpilot_solids2_trim150_scaffold_5_curated_169
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173407..174303)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030874CA
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAK72983.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_170
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174300..175358)
DNA (1059bp) protein (353aa)
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAK72982.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein id=14632587 bin=bin9_gal15 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_171
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175355..176896)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035D1E43
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAK72981.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_172
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176906..177928)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F5C437
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK72980.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins
scnpilot_solids2_trim150_scaffold_5_curated_173
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177876..178697)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FF6D9
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAK72979.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_174
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178849..179643)
DNA (795bp) protein (265aa)
Transcriptional regulator, IclR family n=1 Tax=Burkholderia xenovorans (strain LB400) PF5_BURXL">RepID=Q13PF5_BURXL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABE34034.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_5_curated_175
unknown

Not on your lists

179946..180101
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_176
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180186..181292
DNA (1107bp) protein (369aa)
Monooxygenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY99_9BURK
Monooxygenase {ECO:0000313|EMBL:ETR78287.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_177
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181321..182067)
DNA (747bp) protein (249aa)
IclR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI000376ABDE
regulatory protein IclR
Regulatory proteins, IclR {ECO:0000313|EMBL:ABE37843.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
scnpilot_solids2_trim150_scaffold_5_curated_178
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182406..183572
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JYZ6_9PROT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EKE75549.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
scnpilot_solids2_trim150_scaffold_5_curated_179
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183584..184354
DNA (771bp) protein (257aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZK2_9BURK
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EHL22207.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_5_curated_180
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184362..186203
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMW8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90558.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
Displaying items 151-180 of 349 in total

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