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scnpilot_solids2_trim150_scaffold_5_curated

Search features with annotation key words

Displaying items 181-210 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5_curated_181
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186209..187444
DNA (1236bp) protein (412aa)
Putative Formyl-CoA transferase {ECO:0000313|EMBL:CCE06654.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CCE06654.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative Formyl-CoA transferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJL6_9BRAD
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_solids2_trim150_scaffold_5_curated_182
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187444..189213
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TYR1_BORBO
Uncharacterized protein {ECO:0000313|EMBL:CCN25235.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_183
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189306..190337
DNA (1032bp) protein (344aa)
Trap-type c4-dicarboxylate transport system, periplasmic component n=1 Tax=Nitratireductor indicus C115 RepID=K2PAJ9_9RHIZ
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:AJE46765.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Putative oxobutyric acid and 3-methyl oxovaleric acid ABC transporter,periplasmic solute-binding component
scnpilot_solids2_trim150_scaffold_5_curated_184
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190413..191264
DNA (852bp) protein (284aa)
Putative amidohydrolase n=1 Tax=Burkholderia xenovorans (strain LB400) PF4_BURXL">RepID=Q13PF4_BURXL
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:ABE34035.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_5_curated_185
unknown

Not on your lists

191264..191788
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_186
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191785..193074
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FSH8_PELBH
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:AJE46767.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_solids2_trim150_scaffold_5_curated_187
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193229..194740)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003610206
Uncharacterized protein {ECO:0000313|EMBL:ESQ86615.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_5_curated_188
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194700..195899)
DNA (1200bp) protein (400aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036369A5
GtrA-like family protein {ECO:0000313|EMBL:AID33427.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
scnpilot_solids2_trim150_scaffold_5_curated_189
unknown

Not on your lists

comp(196179..196313)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_190
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196586..197938
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003722258
Putative membrane protein {ECO:0000313|EMBL:AID33428.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_191
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198057..198629)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036922AD
Protein tyrosine phosphatase {ECO:0000313|EMBL:KGD86620.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_192
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198868..199548)
DNA (681bp) protein (227aa)
Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6G6_9RHOB
Transcriptional regulatory protein {ECO:0000313|EMBL:EAQ23802.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_193
unknown

Not on your lists

199926..200081
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5_curated_194
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200081..201073
DNA (993bp) protein (331aa)
2-oxo acid dehydrogenase subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Putative 2-oxo acid dehydrogenase alpha subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV22_PUSST
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB15905.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
scnpilot_solids2_trim150_scaffold_5_curated_195
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201066..202040
DNA (975bp) protein (325aa)
Putative pyruvate dehydrogenase E1 beta subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2KH27_9PROT
Putative pyruvate dehydrogenase E1 beta subunit {ECO:0000313|EMBL:EKE76585.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
PDH; pyruvate dehydrogenase E1 component subunit beta, mitochondrial
scnpilot_solids2_trim150_scaffold_5_curated_196
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202053..202838
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV20_PUSST
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEC21184.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_5_curated_197
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202844..204064
DNA (1221bp) protein (407aa)
Probable 2-oxo acid dehydrogenases acyltransferase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QP56_BORBO
2-oxo acid dehydrogenases acyltransferase
Probable 2-oxo acid dehydrogenases acyltransferase {ECO:0000313|EMBL:CCN25257.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
scnpilot_solids2_trim150_scaffold_5_curated_198
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204065..205237
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Putative acyl-CoA dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV17_PUSST
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:AEC21181.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_5_curated_199
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205260..206765
DNA (1506bp) protein (502aa)
Acyl-CoA synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPW3_9PROT
Acyl-CoA synthetase {ECO:0000313|EMBL:EKE67280.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative AMP-dependent synthetase and ligase
scnpilot_solids2_trim150_scaffold_5_curated_200
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206781..207110)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E5AEA7
ycii-like protein; K09780 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ72020.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
scnpilot_solids2_trim150_scaffold_5_curated_201
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207197..208030)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVP5_PUSST
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids2_trim150_scaffold_5_curated_202
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(208240..208953)
DNA (714bp) protein (238aa)
putative demethylmenaquinone methyltransferase; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
Putative demethylmenaquinone methyltransferase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XGJ4_9NOCA
Putative demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EME22679.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
scnpilot_solids2_trim150_scaffold_5_curated_203
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208994..210292)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VFV6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU11677.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
thermophilic desulfurizing enzyme
scnpilot_solids2_trim150_scaffold_5_curated_204
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210331..211317)
DNA (987bp) protein (329aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SE28_9SPHN
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EZP79649.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
scnpilot_solids2_trim150_scaffold_5_curated_205
unknown

Not on your lists

211439..212107
DNA (669bp) protein (223aa)
GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTY8_9BURK
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:CPR21945.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_206
Halomonas sp. KHS3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212151..213446)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036C0B95
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIN16769.1}; TaxID=866350 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KHS3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_207
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213443..213967)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3JY81_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KHJ52557.1}; TaxID=115561 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas hydrothermalis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_208
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213994..215001)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035EC24D
ABC transporter substrate-binding protein
Putative ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:CCJ48010.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
scnpilot_solids2_trim150_scaffold_5_curated_209
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215113..216036)
DNA (924bp) protein (308aa)
Gluconolactonase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1I4_ALCXX
Gluconolactonase {ECO:0000313|EMBL:EGP45852.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_210
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216159..217124
DNA (966bp) protein (322aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZI5_9BRAD
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJN10621.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
Displaying items 181-210 of 349 in total

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