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scnpilot_solids2_trim150_scaffold_5_curated

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Displaying items 241-270 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5_curated_241
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255876..256700
DNA (825bp) protein (275aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2L8L4_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:EZQ13503.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative sugar ABC transporter, permease protein; K02026 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_242
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256697..257758
DNA (1062bp) protein (354aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0BP66_RHILT
ABC transporter {ECO:0000313|EMBL:EZQ13504.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_243
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257755..258519
DNA (765bp) protein (255aa)
putative glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F1A82
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EZQ13505.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_5_curated_244
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258516..259517
DNA (1002bp) protein (334aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B32C19
LacI family transcriptional regulator {ECO:0000313|EMBL:EXL03219.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
transcriptional regulator, LacI family
scnpilot_solids2_trim150_scaffold_5_curated_245
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259517..260320
DNA (804bp) protein (268aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SX75_9RHIZ
Inositol phosphatase {ECO:0000313|EMBL:EZQ13507.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_5_curated_246
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260336..261229)
DNA (894bp) protein (298aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium sp. CF142 RepID=J2L8L1_9RHIZ
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EZQ13508.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_247
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261573..262442)
DNA (870bp) protein (290aa)
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGS2_9PROT
ABC transporter, permease protein {ECO:0000313|EMBL:EFH13483.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_248
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(262439..263365)
DNA (927bp) protein (309aa)
ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI000319C056
Putative glutathione ABC transporter, permease protein GsiC {ECO:0000313|EMBL:EHM00983.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative oligopeptide ABC superfamily, permease protein
scnpilot_solids2_trim150_scaffold_5_curated_249
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263359..264333)
DNA (975bp) protein (325aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F89B45
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH13481.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_250
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(264335..265402)
DNA (1068bp) protein (356aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGR9_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC70495.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative oligopeptide ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_251
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265402..267030)
DNA (1629bp) protein (543aa)
ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YUH8_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI14336.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_252
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267045..268598)
DNA (1554bp) protein (518aa)
Phosphonate monoester hydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0F7_9PROT
Phosphonate monoester hydrolase {ECO:0000313|EMBL:EHM00979.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
sulfatase
scnpilot_solids2_trim150_scaffold_5_curated_253
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268725..269492
DNA (768bp) protein (256aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A747_9PROT
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EHL96700.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
glpQ; Glycerophosphoryl diester phosphodiesterase
scnpilot_solids2_trim150_scaffold_5_curated_254
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269579..270259)
DNA (681bp) protein (227aa)
UPI0003CE4E85 related cluster n=1 Tax=unknown RepID=UPI0003CE4E85
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY78741.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_255
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270551..271324
DNA (774bp) protein (258aa)
UPI0003CEC0BB related cluster n=1 Tax=unknown RepID=UPI0003CEC0BB
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ESY75653.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_5_curated_256
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271435..272304
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDE5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64505.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_257
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272313..273185
DNA (873bp) protein (291aa)
Gluconolactonase n=1 Tax=Pseudomonas sp. GM21 RepID=J2WHV4_9PSED
IclR family transcriptional regulator {ECO:0000313|EMBL:KDM66098.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SMP-30/gluconolaconase/LRE domain-containing protein
scnpilot_solids2_trim150_scaffold_5_curated_258
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273747..274538)
DNA (792bp) protein (264aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhizobium sp. CF080 RepID=J2RBN6_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:ETR76891.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
alpha/beta hydrolase
scnpilot_solids2_trim150_scaffold_5_curated_259
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274577..275329)
DNA (753bp) protein (251aa)
Carboxymuconolactone decarboxylase n=1 Tax=Nitratireductor indicus C115 RepID=K2N2J8_9RHIZ
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EKF41623.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
carboxymuconolactone decarboxylase
scnpilot_solids2_trim150_scaffold_5_curated_260
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275438..276670)
DNA (1233bp) protein (411aa)
III protein, CoA-transferase family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZB1_9PROT
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
scnpilot_solids2_trim150_scaffold_5_curated_261
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276710..277165)
DNA (456bp) protein (152aa)
MaoC domain-containing protein dehydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2NQJ8_9RHIZ
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EKF41630.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_5_curated_262
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277177..277620)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NUX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41629.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_5_curated_263
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

277823..278731
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2H5_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:EHL99673.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_5_curated_264
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278740..279507)
DNA (768bp) protein (256aa)
Alpha/beta hydrolase fold protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AA13_STAND
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADH90800.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_5_curated_265
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279531..280409)
DNA (879bp) protein (293aa)
Beta-lactamase {ECO:0000313|EMBL:KFC77802.1}; EC=3.-.-.- {ECO:0000313|EMBL:KFC77802.1};; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0GXZ4_9SPHN
Putative Beta-lactamase
scnpilot_solids2_trim150_scaffold_5_curated_266

Not on your lists

280697..281473
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZ44_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKN66254.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_267
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281482..282357
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYJ8_9ALTE
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:AKH98863.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_268
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282354..283403
DNA (1050bp) protein (350aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6W7_ALIDK
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB86579.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_5_curated_269
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283448..284665
DNA (1218bp) protein (406aa)
Extracellular ligand-binding receptor n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYK0_9ALTE
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AKH98861.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
amino acids binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_270
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284683..285450
DNA (768bp) protein (256aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED8340
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AKH98860.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Displaying items 241-270 of 349 in total

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