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scnpilot_solids2_trim150_scaffold_181_curated

Search features with annotation key words

Displaying items 61-81 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_181_curated_61
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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66977..67435
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIJ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11884.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
thioesterase superfamily protein
scnpilot_solids2_trim150_scaffold_181_curated_62
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67442..68083
DNA (642bp) protein (214aa)
S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:ESZ62879.1}; EC=3.2.2.9 {ECO:0000313|EMBL:ESZ62879.1};; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9); K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]
S-adenosylhomocysteine nucleosidase n=2 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G032_9RHIZ
scnpilot_solids2_trim150_scaffold_181_curated_63
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68080..68583
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030A1731
Acetyltransferase {ECO:0000313|EMBL:ESZ42795.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
putative acetyltransferase
scnpilot_solids2_trim150_scaffold_181_curated_64
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(68552..69169)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T8C6_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ08538.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
scnpilot_solids2_trim150_scaffold_181_curated_65
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69279..70841
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D4D2E
scnpilot_solids2_trim150_scaffold_181_curated_66
unknown

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70963..71610
DNA (648bp) protein (216aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_181_curated_67
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71772..71987
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62894.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_181_curated_68
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71984..72469)
DNA (486bp) protein (162aa)
Peroxiredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD0_9GAMM
Peroxiredoxin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids2_trim150_scaffold_181_curated_69
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72472..73065)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003658DD9
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids2_trim150_scaffold_181_curated_70
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73148..73726
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036AA84F
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE61546.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_181_curated_71
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73755..74408)
DNA (654bp) protein (218aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44
FOG: WD40-like repeat {ECO:0000313|EMBL:CDY75149.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR42695.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_181_curated_72
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74443..75663)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13KI4_BURXL
DNA-binding protein {ECO:0000313|EMBL:KJZ63791.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_181_curated_73
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75749..76021
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQ92_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX37872.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_181_curated_74
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76096..76674
DNA (579bp) protein (193aa)
2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase n=1 Tax=Burkholderia sp. TJI49 RepID=F0FX42_9BURK
2'-5' RNA ligase {ECO:0000313|EMBL:ETR74852.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_solids2_trim150_scaffold_181_curated_75
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76748..77194
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI0003667862
MarR family transcriptional regulator {ECO:0000313|EMBL:KDP76558.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hpaR; homoprotocatechuate degradation operon regulator, HpaR
scnpilot_solids2_trim150_scaffold_181_curated_76
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77207..78013)
DNA (807bp) protein (269aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC:4.1.1.77); K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
2-oxo-hepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:ACI57701.1}; EC=4.1.1.77 {ECO:0000313|EMBL:ACI57701.1};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0B4E6_RHILV
scnpilot_solids2_trim150_scaffold_181_curated_77
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78010..78882)
DNA (873bp) protein (291aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0L205_RHILT
fumarylacetoacetate hydrolase family protein
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJC84204.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
scnpilot_solids2_trim150_scaffold_181_curated_78
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78890..80317)
DNA (1428bp) protein (476aa)
Pyridoxal-dependent decarboxylase conserved domain {ECO:0000313|EMBL:CCE99683.1}; EC=4.1.1.28 {ECO:0000313|EMBL:CCE99683.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Putative pyridoxal-dependent decarboxylase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF51_RHIFH
dcd1; putative pyridoxal-dependent decarboxylase
scnpilot_solids2_trim150_scaffold_181_curated_79
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80348..81328)
DNA (981bp) protein (327aa)
hpaD; homoprotocatechuate 2,3-dioxygenase (EC:1.13.11.2)
Metapyrocatechase PheB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC37_9RHIZ
Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I {ECO:0000313|EMBL:CDN57591.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
scnpilot_solids2_trim150_scaffold_181_curated_80
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81335..82852)
DNA (1518bp) protein (506aa)
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent {ECO:0000313|EMBL:CDX61300.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDX61300.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase n=10 Tax=Brucella abortus RepID=C9US79_BRUAO
scnpilot_solids2_trim150_scaffold_181_curated_81
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82866..83261)
DNA (396bp) protein (132aa)
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWG7_9RHIZ
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:EYR78707.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hpcD; 5-carboxymethyl-2-hydroxymuconate delta isomerase
Displaying items 61-81 of 81 in total

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