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scnpilot_solids2_trim150_scaffold_181_curated_81

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(82866..83261)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWG7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 127.0
  • Bit_score: 197
  • Evalue 9.30e-48
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:EYR78707.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 127.0
  • Bit_score: 197
  • Evalue 1.30e-47
hpcD; 5-carboxymethyl-2-hydroxymuconate delta isomerase similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 127.0
  • Bit_score: 191
  • Evalue 1.20e-46

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGCCGCATCTGGCGATCGAATATTCCGCCAATCTCGAGGAAAAGGCCGATCTCGACGCGCTCTGCCGCGCGGTGCACGCGGCGATCCTCAAAAGCGGCCTGTTCGAGGTGGGCGCCGTTCGTGTGAGGGCATTTCCGGCACGCCACTTCGCGATTGCCGATCTCAAGCCGGAAAACGCCTTTGTCGACATGTCCTTCCGTATCGGCAAGGGGCGCGGAGCAGACGACAAGAAGCGGGCCGGCGAAGCGATCTTCGCGGCCGCGAGCGAAGTCTTGGCGCCTCTTTTGGAGACCCCGCATTTCGCGCTCTCGCTGGAAGTCCGCGAGATCGACGCGGAGTTGTCGTGGAAGAAGAACGCCATGCACGCCCGGCTTCGGGCTGACGGAAACAAGTGA
PROTEIN sequence
Length: 132
MPHLAIEYSANLEEKADLDALCRAVHAAILKSGLFEVGAVRVRAFPARHFAIADLKPENAFVDMSFRIGKGRGADDKKRAGEAIFAAASEVLAPLLETPHFALSLEVREIDAELSWKKNAMHARLRADGNK*