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scnpilot_solids2_trim150_scaffold_1_curated

Search features with annotation key words

Displaying items 301-330 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1_curated_301
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312876..313166
DNA (291bp) protein (97aa)
Transcriptional regulator n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AA78_RHIRD
Addiction module antitoxin {ECO:0000313|EMBL:KJF65212.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
addiction module antidote protein
scnpilot_solids2_trim150_scaffold_1_curated_302
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313192..314565)
DNA (1374bp) protein (458aa)
glutamate/cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate/cysteine ligase {ECO:0000313|EMBL:AEH87159.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AEH87159.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
UPI0003CF89C4 related cluster n=1 Tax=unknown RepID=UPI0003CF89C4
scnpilot_solids2_trim150_scaffold_1_curated_303
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314690..315424)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX1_9RHIZ
RNA methyltransferase, RsmE family
scnpilot_solids2_trim150_scaffold_1_curated_304
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315463..316110)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F26825
Uncharacterized protein {ECO:0000313|EMBL:EKF41163.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_305
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316345..316485
DNA (141bp) protein (47aa)
Uncharacterized protein n=7 Tax=Mesorhizobium RepID=V7EYE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX23571.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_306
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316482..317240)
DNA (759bp) protein (253aa)
bis(5'nucleosyl)-tetraphosphatase, ApaH; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003725DB5
Bis(5'nucleosyl)-tetraphosphatase, ApaH {ECO:0000313|EMBL:EHH02360.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_1_curated_307
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317249..317923)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54453.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K00782 hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_308
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317920..319374)
DNA (1455bp) protein (485aa)
Iron-sulfur cluster binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX8_9RHIZ
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:EHK54454.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
iron-sulfur cluster binding protein
scnpilot_solids2_trim150_scaffold_1_curated_309
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319628..320488)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54455.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_310
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320615..322111
DNA (1497bp) protein (499aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15]
UPI0003D03A10 related cluster n=1 Tax=unknown RepID=UPI0003D03A10
FAD-binding protein {ECO:0000313|EMBL:ESZ18302.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
scnpilot_solids2_trim150_scaffold_1_curated_311
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322172..322423
DNA (252bp) protein (84aa)
Regulator of stationary/sporulation gene expression n=1 Tax=Rhodanobacter sp. 115 RepID=I4WP69_9GAMM
Transcriptional regulator AbrB {ECO:0000313|EMBL:KFB10992.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
transcriptional regulator, AbrB family
scnpilot_solids2_trim150_scaffold_1_curated_312
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322405..322821
DNA (417bp) protein (139aa)
Putative nucleic-acid-binding protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WP70_9GAMM
Putative nucleic-acid-binding protein {ECO:0000313|EMBL:EIM01262.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_313
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322818..324032
DNA (1215bp) protein (405aa)
FAD linked oxidase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY3_9RHIZ
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EHK54406.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit
scnpilot_solids2_trim150_scaffold_1_curated_314
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324066..324443
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54407.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_315
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324456..325805
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N0Z2_9RHIZ
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
scnpilot_solids2_trim150_scaffold_1_curated_316

Not on your lists

comp(325823..326185)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037EB9AD
Uncharacterized protein {ECO:0000313|EMBL:KKN79406.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_317

Not on your lists

comp(326178..326471)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003686068
Uncharacterized protein {ECO:0000313|EMBL:KKN79407.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1_curated_318
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326522..327466)
DNA (945bp) protein (315aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNB2_MESCW
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_1_curated_319
unknown

Not on your lists

327623..327763
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1_curated_320
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(327886..328713)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRB4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03168.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
ErfK/YbiS/YcfS/YnhG
scnpilot_solids2_trim150_scaffold_1_curated_321
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

328973..329611
DNA (639bp) protein (213aa)
tag; DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY8_9RHIZ
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EKF41151.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_1_curated_322
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


329936..331405
DNA (1470bp) protein (490aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
UPI0003D00530 related cluster n=1 Tax=unknown RepID=UPI0003D00530
scnpilot_solids2_trim150_scaffold_1_curated_323
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331628..332749
DNA (1122bp) protein (374aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F617_9RHIZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit
scnpilot_solids2_trim150_scaffold_1_curated_324
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332925..333620
DNA (696bp) protein (232aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=2 Tax=Mesorhizobium RepID=V7GKL3_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_325
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333639..334025)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000313A3F8
Putative quinol oxidase subunit {ECO:0000313|EMBL:CCV13005.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_1_curated_326
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334152..335543)
DNA (1392bp) protein (464aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N973_9RHIZ
scnpilot_solids2_trim150_scaffold_1_curated_327
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335852..337108)
DNA (1257bp) protein (419aa)
aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
Aminopeptidase II n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWI2_AZOC5
Aminopeptidase II {ECO:0000313|EMBL:BAF90432.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_1_curated_328
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(337159..337566)
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CF84_9RHIZ
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJN04544.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
zur; zinc uptake transcriptional regulator; K09823 Fur family transcriptional regulator, zinc uptake regulator
scnpilot_solids2_trim150_scaffold_1_curated_329
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(337639..338439)
DNA (801bp) protein (267aa)
UPI0003CDDEB7 related cluster n=1 Tax=unknown RepID=UPI0003CDDEB7
ABC transporter permease {ECO:0000313|EMBL:ESY28813.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
znuB; cation ABC transporter permease
scnpilot_solids2_trim150_scaffold_1_curated_330
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338423..339217)
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ESP1_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX12957.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
ABC transporter family protein
Displaying items 301-330 of 463 in total

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