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scnpilot_solids2_trim150_scaffold_787_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_787_curated_1
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2039)
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI00036C202F
DNA helicase {ECO:0000313|EMBL:AKI02678.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
UvrD/REP helicase
scnpilot_solids2_trim150_scaffold_787_curated_2
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2046..2387)
DNA (342bp) protein (114aa)
ATPase (EC:3.1.21.-)
GTPase subunit of restriction endonuclease n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0D0I9_RHILT
Uncharacterized protein {ECO:0000313|EMBL:KEQ03683.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
scnpilot_solids2_trim150_scaffold_787_curated_3
unknown

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comp(2384..3166)
DNA (783bp) protein (261aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_787_curated_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3219..6185)
DNA (2967bp) protein (989aa)
UPI0003CE7CB5 related cluster n=1 Tax=unknown RepID=UPI0003CE7CB5
DNA methylase {ECO:0000313|EMBL:ESY66204.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Adenine specific DNA methylase (Mod-related
scnpilot_solids2_trim150_scaffold_787_curated_5
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6188..6793)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 817 RepID=N8X0R8_9GAMM
HNH endonuclease
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
scnpilot_solids2_trim150_scaffold_787_curated_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6790..9840)
DNA (3051bp) protein (1017aa)
UPI0003CF2FFE related cluster n=1 Tax=unknown RepID=UPI0003CF2FFE
Restriction endonuclease {ECO:0000313|EMBL:ESY66202.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
putative Type III restriction endonuclease, res subunit
scnpilot_solids2_trim150_scaffold_787_curated_7
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10339..12582)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000362C44F
Uncharacterized protein {ECO:0000313|EMBL:KJF70366.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein; K06915
scnpilot_solids2_trim150_scaffold_787_curated_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12745..13395
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W406_METEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY30312.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
scnpilot_solids2_trim150_scaffold_787_curated_9
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13419..13694)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JPZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY51126.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_787_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13897..15453)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C0A89
Uncharacterized protein {ECO:0000313|EMBL:CCF19987.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
RNA-directed DNA polymerase
scnpilot_solids2_trim150_scaffold_787_curated_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15799..16563)
DNA (765bp) protein (255aa)
Putative phosphoesterase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MFD4_RHISN
putative phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:ACP25991.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
scnpilot_solids2_trim150_scaffold_787_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16719..17519)
DNA (801bp) protein (267aa)
ATP-dependent Zn protease n=1 Tax=Rhizobium sp. CF142 RepID=J2L2L1_9RHIZ
ATP-dependent Zn protease {ECO:0000313|EMBL:AHF82575.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
ATP-dependent Zn protease
scnpilot_solids2_trim150_scaffold_787_curated_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17516..19432)
DNA (1917bp) protein (639aa)
AAA+ family ATPase n=1 Tax=Rhizobium sp. CF142 RepID=J1T7R4_9RHIZ
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:AID30401.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_787_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19476..21005)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI00036D2400
ATPase AAA
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ACE99690.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids2_trim150_scaffold_787_curated_15
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21015..21356)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQ03_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AID30400.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_787_curated_16
unknown

Not on your lists

21534..21803
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_787_curated_17
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23359..24576
DNA (1218bp) protein (406aa)
Phage integrase family protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV14_9GAMM
Putative site specific recombinase {ECO:0000313|EMBL:AIA54530.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
int; tyrosine-based site-specific recombinase CMGI-7
scnpilot_solids2_trim150_scaffold_787_curated_18
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24580..25674
DNA (1095bp) protein (365aa)
Integrase family protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z714_9NEIS
Integrase family protein {ECO:0000313|EMBL:EEG07329.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
putative enzyme; Integration, recombination (Phage or Prophage Related
Displaying 18 items

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