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scnpilot_solids2_trim150_scaffold_48_curated

Search features with annotation key words

Displaying items 91-120 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_48_curated_91
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97469..98326
DNA (858bp) protein (286aa)
Cytochrome c1 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HU6_RHILO
cytochrome C1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
Cytochrome c1 {ECO:0000313|EMBL:BAB49770.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_48_curated_92
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98460..98876
DNA (417bp) protein (139aa)
Aldehyde-activating protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1D5_9RHIZ
Aldehyde-activating protein {ECO:0000313|EMBL:ESZ06617.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
glutathione-dependent formaldehyde-activating protein
scnpilot_solids2_trim150_scaffold_48_curated_93
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98944..99489
DNA (546bp) protein (182aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP77_9RHIZ
scnpilot_solids2_trim150_scaffold_48_curated_94
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99499..99840)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQI5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57006.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_95
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99868..100338)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP79_9RHIZ
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:CDX63497.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
MaoC domain-containing protein dehydratase
scnpilot_solids2_trim150_scaffold_48_curated_96
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100335..100802)
DNA (468bp) protein (156aa)
MaoC domain-containing protein dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP80_9RHIZ
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EHK57466.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
MaoC domain-containing protein dehydratase
scnpilot_solids2_trim150_scaffold_48_curated_97
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101032..101247
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QX95_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJS16629.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_98
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101394..101834
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000315517C
Uncharacterized protein {ECO:0000313|EMBL:CDM25973.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K09943 hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_99

Not on your lists

comp(101878..102339)
DNA (462bp) protein (154aa)
Small-conductance mechanosensitive channel n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKO01406.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
small-conductance mechanosensitive channel; K16052 MscS family membrane protein YnaI
scnpilot_solids2_trim150_scaffold_48_curated_100
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102279..103028)
DNA (750bp) protein (250aa)
Small-conductance mechanosensitive channel protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWI8_9BURK
Low conductance mechanosensitive channel YnaI {ECO:0000313|EMBL:KFZ91379.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
small-conductance mechanosensitive channel; K16052 MscS family membrane protein YnaI
scnpilot_solids2_trim150_scaffold_48_curated_101
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103109..104212)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FM97_9RHIZ
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GTP-binding protein YchF
scnpilot_solids2_trim150_scaffold_48_curated_102
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104221..104670)
DNA (450bp) protein (150aa)
PilT-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP83_9RHIZ
PilT-like protein {ECO:0000313|EMBL:EHK57469.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PilT protein domain protein
scnpilot_solids2_trim150_scaffold_48_curated_103
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104657..104911)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB09487.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
scnpilot_solids2_trim150_scaffold_48_curated_104
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105015..105737)
DNA (723bp) protein (241aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
UPI0003CE8C24 related cluster n=1 Tax=unknown RepID=UPI0003CE8C24
scnpilot_solids2_trim150_scaffold_48_curated_105
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(105762..106415)
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP86_9RHIZ
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
scnpilot_solids2_trim150_scaffold_48_curated_106
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106648..107580)
DNA (933bp) protein (311aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583, ECO:0000313|EMBL:ABG63547.1}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
Ribose-phosphate pyrophosphokinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GC8_MESSB
scnpilot_solids2_trim150_scaffold_48_curated_107
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107708..108001)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV61_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV03616.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
spsF; hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_108
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107998..108237)
DNA (240bp) protein (80aa)
UPI0003CE4E6A related cluster n=1 Tax=unknown RepID=UPI0003CE4E6A
Uncharacterized protein {ECO:0000313|EMBL:ESY78231.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_109
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108319..108900)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAP2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11216.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_110
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108979..110130)
DNA (1152bp) protein (384aa)
Xaa-Pro dipeptidase n=1 Tax=Rhizobium loti RepID=UPI00036B568A
Peptidase M24 {ECO:0000313|EMBL:CDX15875.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hydrolase/peptidase
scnpilot_solids2_trim150_scaffold_48_curated_111
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110136..110930)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV13_9RHIZ
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
uncharacterized protein, YfiH family
scnpilot_solids2_trim150_scaffold_48_curated_112
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111098..112519)
DNA (1422bp) protein (474aa)
(R)-6-hydroxynicotine oxidase (EC:1.5.3.6)
FAD/FMN-dependent dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1I0_9RHIZ
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIM30072.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_48_curated_113
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112703..113398
DNA (696bp) protein (232aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3C4D0_9RHIZ
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EUC01260.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
HxlR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_48_curated_114
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113475..114551)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP94_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57480.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_48_curated_115
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114535..115398)
DNA (864bp) protein (288aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GD3_MESSB
scnpilot_solids2_trim150_scaffold_48_curated_116
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115731..116045
DNA (315bp) protein (105aa)
Mll2675 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HX0_RHILO
hypothetical protein; K09806 hypothetical protein
Mll2675 protein {ECO:0000313|EMBL:BAB49746.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_48_curated_117
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116378..116878
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED5100
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11322.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_48_curated_118
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116887..117246
DNA (360bp) protein (120aa)
Chaperone n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPA0_9RHIZ
Chaperone {ECO:0000313|EMBL:EHK57486.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
chaperone; K06878 tRNA-binding protein
scnpilot_solids2_trim150_scaffold_48_curated_119
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117413..118876)
DNA (1464bp) protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ATPase domain-containing protein; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
UPI0003CEA215 related cluster n=1 Tax=unknown RepID=UPI0003CEA215
scnpilot_solids2_trim150_scaffold_48_curated_120
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119004..119708)
DNA (705bp) protein (235aa)
UPI0003CE8A21 related cluster n=1 Tax=unknown RepID=UPI0003CE8A21
Chemotaxis protein CheY {ECO:0000313|EMBL:ESY62838.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
winged helix family two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR
Displaying items 91-120 of 176 in total

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