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scnpilot_solids2_trim150_scaffold_112_curated_121

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 132228..132953

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XKV0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 225.0
  • Bit_score: 155
  • Evalue 5.70e-35
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 225.0
  • Bit_score: 155
  • Evalue 1.80e-35
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU52934.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 225.0
  • Bit_score: 155
  • Evalue 8.00e-35

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCCGGCGAAAGCGGAAATCGAATCGGATTTCGAGAGTGCCTCGCCGGAGAGGGGGATCGCGCTCAAGCTTGCGAAGGTGAATCGCGTCGATTCGCTGGGCGACCAGGCGGTGGCCAGCTTGCGCGGCGCCTTGCGGCGCGGCGCGCTTTTGCCCGGTCAGCGTCTCACGGTTCGCGAGATAGCCGATACGCTCGATATCAGCCTGACGCCGGCGCGCGAGGCGCTCAACCGATTGCTGGCGGAAGGCGTTCTCGACCAGACGCCGGATCGGGTCGCCGTGGTCCCGCTTCTCACCAAGGAGCGCTATGGCGAAATCTGTGCCATCCGGCTCGTCCTTGAAGGGATGGCGGCCAGGGAAGCCTGCGCGCGGCTGTCAGGGTCAGATCTCGATCACCTGAAGGAACTTTACGAGCGACATGCCTCCGCCTACCGCTCTCGCGACGCCAGGACCTCGCTTCGTCTCAACGAGGATTTCCATTTCACCATCTATGGCGCCTGTGCGATGCCGACTCTGCTCCAGATCCTGGAAACGACGTGGCTTAGGGTCGGCCCATCGATGAATCTCCTCTTTACGGCCTCTTACGATCCGGACTGGACCGGCGGTACGCACCACCAGGCCATGCTTCGCGCCATCGCCGCCGGTGACGCGGCGGCGCTGGAAGAGGCCGTCCGAGGCGATCTCGTCGACGGGCGCGCGCGCCTGACGCCGCATCTTCCGGACTGA
PROTEIN sequence
Length: 242
MPAKAEIESDFESASPERGIALKLAKVNRVDSLGDQAVASLRGALRRGALLPGQRLTVREIADTLDISLTPAREALNRLLAEGVLDQTPDRVAVVPLLTKERYGEICAIRLVLEGMAAREACARLSGSDLDHLKELYERHASAYRSRDARTSLRLNEDFHFTIYGACAMPTLLQILETTWLRVGPSMNLLFTASYDPDWTGGTHHQAMLRAIAAGDAAALEEAVRGDLVDGRARLTPHLPD*