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scnpilot_solids2_trim150_scaffold_1_curated_347

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 359625..361280

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 580.0
  • Bit_score: 549
  • Evalue 5.70e-153
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 481.0
  • Bit_score: 513
  • Evalue 1.00e-142
Pseudouridine synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2NPB0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 580.0
  • Bit_score: 549
  • Evalue 4.00e-153

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGACGACGACGCAAAGAACGAACGGCGCGGACGGCGCCCCGCAGGCGCGGAGCGCACGATCTCCCCCTCGGGCGCCCCCTTGAGCGGGGACAGCGACAATTCCGAGCGCATCGCCAAGCGGCTGGCGCGGGCCGGCATCTCCTCGCGCCGCGAGGCCGAGGCGCTGATCGCCGCCGGCCGCGTCCGCGTCAACGGCGTGGTGCTTTCCTCGCCTGCCTTCAATGTCGGGCCGCAGGACCGGATCGAGGTCGACGGAACGCCGATCCCCGCGATCGAGCGCACGCGGCTCTTCCTGTTCCATAAGCCGACGGGCGTGGTCACGACCAATCGCGACCCGCAAGGCCGCAGGACCGTGTTCGATTGTCTGCCGGCTGCGCTGCCGAGGCTGATGACGGTCGGCCGGCTCGATATCAATACGGAAGGCCTGCTGCTTCTCACCAATGATGGCGGGCTGGCCCGCGTTCTGGAGCTTCCCACGACCGGCTGGCTGAGGCGCTACCGTGTTCGCGTGCATGGCAAGGTAGAGGAGGAGGCGCTTACGTCGCTGCGTGACGGCATTGCGGTAGATGGCGTTTTCTATGGCGCCGTCGAGGCTGCGCTCGATCGTGAGCAGGGAACGAACGCGTGGCTGACGATCGGCTTGAGGGAAGGCAAGAACCGCGAGGTGAAGAACATTCTGGGCGCGCTCGGCCTTGAGGTGACGCGCCTGATCCGCGTCTCCTACGGACCTTTCCAGCTTGGCGAACTGGGCGAGGGCGAGGTGCTGGAATTGAAGGGCCGCCTGTTGCGCGACCAGTTGGGCGAGCGGCTGATCGAAGAGGCCGGCGCCGATTTCGAGGCGGCGGTGGTCAAGCCTTTCTCCAACAGGCCGGTGCGCGCGGGCCGGGAAGAGGTTGAGAAGCGTCCGTCGCGCTCCCCGCAGCCCCGTGTCGAGGAAGGCGGCCTCATCCGCAACCGCAAGCGCACCCGTGAGCGGCAGCGCGAAGACGCGCTGGACCGCCTGCAGACCACGCGCCCGCCGCGCTTCGAGAAAAAACGCCCCGAGGACAAGGAACGTAGCCCGGACAGGGGGCGCTTCCAGGACAAGGGCCGCCCCGAAGACAAGAAGCGAGACACGCCCGCCCGGGCACGGGCGTCGAATGTCTGGATGGCTCCGGGCGCGCGCCCGGTCGGCAAGAAGAAGGCTGAAGAGGCGCCCACGCCACGCCCTTCCGGCGACCGGCCTCAGCGCCCCCATCCCGATCGGCCCGATCGGCGTCCGGCGCCTGGCGGGAAGCCGGACGAGCGGCGTGACCGGCCGCGCCAGCCGAGAACGGAAGGCCGGGCGACTGGGCCCGGCGACAAGCCGGAACGCTATCGGTCGGCAGGGAAGCCCAGCGCCGGCAGGACAGAAGGAAAACCCTGGGCCGGCAGGCCGACAGGGAAACCAAGTGCGGGCAGGCCCGCAGGCAAGCCTGGAGGAACCAGGCCAGAGGGAAGCCGGCCAGGCGGAAGCAGCCGGCCGGGCGCACCTCGGAGGGAAGGCGGCCAGCCGGGCGGCTCCAAGCCTGGACCCGGTGGTTCCGCCAAGGGTTCCGCCAGGGGTTCCGGAAGTGGTTTCGGTGGTCGTCCCGCGCCACGCGGTGGCCCGCGCCGGCTGCCGAAGAAAAGCTGA
PROTEIN sequence
Length: 552
MDDDAKNERRGRRPAGAERTISPSGAPLSGDSDNSERIAKRLARAGISSRREAEALIAAGRVRVNGVVLSSPAFNVGPQDRIEVDGTPIPAIERTRLFLFHKPTGVVTTNRDPQGRRTVFDCLPAALPRLMTVGRLDINTEGLLLLTNDGGLARVLELPTTGWLRRYRVRVHGKVEEEALTSLRDGIAVDGVFYGAVEAALDREQGTNAWLTIGLREGKNREVKNILGALGLEVTRLIRVSYGPFQLGELGEGEVLELKGRLLRDQLGERLIEEAGADFEAAVVKPFSNRPVRAGREEVEKRPSRSPQPRVEEGGLIRNRKRTRERQREDALDRLQTTRPPRFEKKRPEDKERSPDRGRFQDKGRPEDKKRDTPARARASNVWMAPGARPVGKKKAEEAPTPRPSGDRPQRPHPDRPDRRPAPGGKPDERRDRPRQPRTEGRATGPGDKPERYRSAGKPSAGRTEGKPWAGRPTGKPSAGRPAGKPGGTRPEGSRPGGSSRPGAPRREGGQPGGSKPGPGGSAKGSARGSGSGFGGRPAPRGGPRRLPKKS*