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scnpilot_solids2_trim150_scaffold_165_curated_70

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(77941..78852)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE3FFE related cluster n=1 Tax=unknown RepID=UPI0003CE3FFE similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 300.0
  • Bit_score: 557
  • Evalue 1.10e-155
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 300.0
  • Bit_score: 557
  • Evalue 1.50e-155
RNA polymerase sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 300.0
  • Bit_score: 555
  • Evalue 9.80e-156

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCCAGAATCTACCCAGTATCGTTTCCGGCGAAGGCGGCCTGTCGCGGTATCTCGAAGAGATACGCCGTTTTCCCATGCTTCAGCCGCAGGAAGAGTACATGCTCGCCAAGCGCTACAACGAGCATGCCGACACCACTGCCGCGCATAAGCTCGTGACCAGCCATCTGCGCCTCGTGGCGAAGATCGCCATGGGGTATCGCGGCTACGGCCTGCCGATCGGCGAGGTCATTTCCGAAGGTAATGTCGGCCTCATGCAGGCGGTGAAGAAGTTCGAACCGGAGCGCGGCTTCCGGCTGGCGACATACGCCATGTGGTGGATCAAGGCTTCCATCCAGGAATATATCCTGCGCTCCTGGAGCCTGGTGAAGATGGGCACCACGGCCAACCAGAAGAGGCTGTTCTTCAACCTGCGCAAGGTGAAGGGCAAGATTCAGGCGCTTGACGACGGCGACCTCAGGCCCGACCAGATCAGCGAGATCGCGACGCGGCTGAACGTCAGCGAGGCCGAAGTGGTCTCCATGAACCGCCGCCTCTCGGGCGATGCCTCGCTCAACGCGCCAATCCGCGCGAGCGAGGGCGAGTCCGGCGAATGGCAGGACTGGCTGGTGGACGACCGCGAAAGCCAGGAGGACATGCTGGTCGAGCAGGACGAACTCCAAAACCGGCGCGGCATGCTCGGCGAGGCGTTGACGGTCCTCAACGAGCGCGAACGGCGTATCTTCGAGGCCCGGCGTCTTTCCGAGGAGCCGATGACGCTGGAGGAACTGTCCTCCGAATTCGGCATCAGTCGCGAACGCGTCCGCCAGATCGAGGTCCGGGCGTTCGAGAAGGTGCAGGATGCGGTGAAGGCCGCCGCCAAGCGGCAGACGCAGTCGCTCCGCACCATCGAGGCGGAGCAGCGGCCGTAA
PROTEIN sequence
Length: 304
MAQNLPSIVSGEGGLSRYLEEIRRFPMLQPQEEYMLAKRYNEHADTTAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKVKGKIQALDDGDLRPDQISEIATRLNVSEAEVVSMNRRLSGDASLNAPIRASEGESGEWQDWLVDDRESQEDMLVEQDELQNRRGMLGEALTVLNERERRIFEARRLSEEPMTLEELSSEFGISRERVRQIEVRAFEKVQDAVKAAAKRQTQSLRTIEAEQRP*