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scnpilot_solids2_trim150_scaffold_48_curated_126

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(123282..123494)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 132
  • Evalue 2.00e-28
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 2.40e-28
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:AID32042.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 1.10e-27

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCGCAGACCGGAACCGTAAAATTCTTCAACACCACCAAGGGCTTCGGCTTCATCACGCCGGACGGCGGCGCGAAGGACGTCTTTGTTCACATCTCCGCACTTCAGGCGTCCGGGCTGCAAAGCCTCGTAGAAGGCCAGAAGGTGACGTTCGATACCGAGCCGGATCGCATGGGCAAGGGCCCGAAGGCGGTCAACCTCCGGGTCGACTGA
PROTEIN sequence
Length: 71
MAQTGTVKFFNTTKGFGFITPDGGAKDVFVHISALQASGLQSLVEGQKVTFDTEPDRMGKGPKAVNLRVD*