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scnpilot_solids2_trim150_scaffold_85_curated_35

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(49430..50929)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 496.0
  • Bit_score: 870
  • Evalue 7.20e-250
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83978.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 496.0
  • Bit_score: 870
  • Evalue 1.00e-249
hypothetical protein; K11900 type VI secretion system protein ImpC similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 497.0
  • Bit_score: 749
  • Evalue 7.60e-214

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGAGCAGCGAAGCCAAGACCGAAACGGCGGCTGCGGCCGCCGGCACAGAGGAAGCTGCCAGCGTCAGCCTGCTGGACCAGGCGATCGAAGCGACGCGCAACACCAAGCGCGACGAAATGCAGGACCTCCTGCGCACCCTCACCTCGGAAGCGCTCTCGGGCACCGTCACGTTCAGCAAGAACCTGACCCAGACCTTCAACCGCGCTATCGAGGCGATCGACGAGAAGCTGTCGAAGCAGCTTTCGGCGATCATGCATCATGCTGACTTCCAGAAGCTGGAGGGAAGCTGGCGCGGGCTCAACCATCTCGTCAAGAATTCCGAGACTGGAGCGACGCTCAAGATTCGCGTCATGAACCTCAGCAAGAAGGAACTTCACAAGGACCTGACGAAGGCTGTCGAATTCGACCAGAGCCAGATCTTCAAGAAGATGTACGAAACGGAATTCGGCACGCCCGGCGGAGAGCCTTACGGCACCCTGATCGGCGACTACGAATTCGGAGCCGGCACGGAAGATCTGGAAGTGCTGCAGGGCATGTCGAATGTCGCGGCGGCGTCCTTCGCGCCGTTCATCGCGGCGTCGAGCCCCGACATGTTCGGGCTGGACAGTTTCACTGAATTGTCCAAGCCGCGCGACCTCGAGAAGATTTTCGAGAGCTCCGAATATATCAAGTGGCGCAGCTTCCGCGACAGCGAAGACAGCCGTTTCGTCACGCTCACCATGCCCAGGGTGCTGGCGCGGGTGCCGTATGGCTCGGCCGGCCGCTCGATCGAGGAATTCAAGTTCGAGGAAGCGCCGGTCAGTGCCAACGGCGTCGTCAGCGCAATGACATCCGACAAGTTCACCTGGATGAACGCGTCTTACGCGCTTGGCGAAAGGCTGACCTCGGCTTTCTCGAAATATGGATGGTGCGTTGCGGTGCGGGGTGCCGAAGGCGGCGGCAAGGTGGAGGACCTGCCGACCTTCACCTTCACCAGCGACGATGGCGACGCCGACCAGCAATGCCCGACCGAAATCGGCATTACCGATCGTCGGGAAGCGGAATTGTCCAAGCTCGGCTTCCTGCCGCTCTGTCACTACAAGGGATCGGACTACGCTGTGTTCTTCGGTTCGCAGACCACGCAGAAGCCGAAGAAATACGACAGCCCCGACGCGACCGCCAATGCCGCGATCTCGGCAAGGTTGCCCTACATCATGGCGACGGCCCGGTTTGCCCATTATCTCAAGGTGATGGGCCGCGACAAGATCGGGTCCTTCATGGAAGCCTCGAACTGCGAAACCTGGCTGAACAACTGGATCCGCAACTACGTGAACGGCAATCCGGATGCGAGCGCGGACATGAAGGCTCAGTATCCGCTCGCCGAGGCCAAGGTGACCGTCACCGAGGTGCCCGGCGCACCGGGTTCCTACAATGCCGTTGCCTATCTCAGGCCCTGGCTGCAGATGGAGGAGCTTACCGCCTCCATGCGGCTGGTGGCGCGCATCCCGCAGATGGGGTGA
PROTEIN sequence
Length: 500
MSSEAKTETAAAAAGTEEAASVSLLDQAIEATRNTKRDEMQDLLRTLTSEALSGTVTFSKNLTQTFNRAIEAIDEKLSKQLSAIMHHADFQKLEGSWRGLNHLVKNSETGATLKIRVMNLSKKELHKDLTKAVEFDQSQIFKKMYETEFGTPGGEPYGTLIGDYEFGAGTEDLEVLQGMSNVAAASFAPFIAASSPDMFGLDSFTELSKPRDLEKIFESSEYIKWRSFRDSEDSRFVTLTMPRVLARVPYGSAGRSIEEFKFEEAPVSANGVVSAMTSDKFTWMNASYALGERLTSAFSKYGWCVAVRGAEGGGKVEDLPTFTFTSDDGDADQQCPTEIGITDRREAELSKLGFLPLCHYKGSDYAVFFGSQTTQKPKKYDSPDATANAAISARLPYIMATARFAHYLKVMGRDKIGSFMEASNCETWLNNWIRNYVNGNPDASADMKAQYPLAEAKVTVTEVPGAPGSYNAVAYLRPWLQMEELTASMRLVARIPQMG*