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scnpilot_solids2_trim150_scaffold_2076_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2076_curated_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1226
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003626007
major facilitator protein
Uncharacterized protein {ECO:0000313|EMBL:ERF83557.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
scnpilot_solids2_trim150_scaffold_2076_curated_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1364..3826)
DNA (2463bp) protein (821aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6BF8E
Clp protease ClpX {ECO:0000313|EMBL:KFG68362.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
scnpilot_solids2_trim150_scaffold_2076_curated_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3834..4211)
DNA (378bp) protein (126aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Rhodovulum sp. PH10 RepID=J5PMS7_9RHOB
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
clpS, ATP-dependent Clp protease adaptor; K06891 ATP-dependent Clp protease adaptor protein ClpS
scnpilot_solids2_trim150_scaffold_2076_curated_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4714..5049)
DNA (336bp) protein (112aa)
phasin family protein n=1 Tax=Xanthobacteraceae RepID=UPI00037F0F99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69759.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_2076_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5322..6983
DNA (1662bp) protein (554aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KFC67457.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFC67457.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB02_METNO
scnpilot_solids2_trim150_scaffold_2076_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7035..7742)
DNA (708bp) protein (236aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA2_9RHIZ
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:EIM24744.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
heat shock protein DnaJ domain-containing protein
scnpilot_solids2_trim150_scaffold_2076_curated_7
unknown

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comp(7768..8019)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2076_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8088..8525)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL98_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67461.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2076_curated_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8828..10801)
DNA (1974bp) protein (658aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL97_9RHIZ
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:EIM24739.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_2076_curated_10
bacterium YEK0313, Bacteria

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comp(10960..11448)
DNA (489bp) protein (163aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
adhC; alcohol dehydrogenase class III (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
alcohol dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037F763B
Displaying 10 items

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