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scnpilot_solids2_trim150_scaffold_2483_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2483_curated_1
bacterium YEK0313, Bacteria

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239..601
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000379B557
Nucleoside triphosphate hydrolase domain-containing protein {ECO:0000313|EMBL:CEJ12251.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
exopolysaccharide biosynthesis protein
scnpilot_solids2_trim150_scaffold_2483_curated_2
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(809..1741)
DNA (933bp) protein (311aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:KCB36928.1}; EC=1.1.1.290 {ECO:0000313|EMBL:KCB36928.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
serA5; phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PND5_9RHOB
scnpilot_solids2_trim150_scaffold_2483_curated_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1779..2774)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F9ED24
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD96426.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_2483_curated_4
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2771..3769)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031CA3E9
DppD protein {ECO:0000313|EMBL:BAQ49818.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
dipeptide/oligopeptide/nickel ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_2483_curated_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3766..4614)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031A47E9
DppC protein {ECO:0000313|EMBL:BAQ49817.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
binding-protein-dependent transport systems inner membrane component
scnpilot_solids2_trim150_scaffold_2483_curated_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4630..5646)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FEE69C
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49816.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_2483_curated_7
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5657..7222)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EBC4C1
DdpA protein {ECO:0000313|EMBL:BAQ49815.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_2483_curated_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7335..8132
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003812015
Uncharacterized protein {ECO:0000313|EMBL:EON13209.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2483_curated_9
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8190..9584
DNA (1395bp) protein (465aa)
FAD dependent oxidoreductase n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YGF7_9BURK
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADX55452.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
Displaying 9 items

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