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scnpilot_solids2_trim150_scaffold_1183_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1183_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)
NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NAD(+) synthase {ECO:0000313|EMBL:EAQ35698.1}; EC=6.3.5.1 {ECO:0000313|EMBL:EAQ35698.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311B8A9
scnpilot_solids2_trim150_scaffold_1183_curated_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(535..873)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E67A2A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB81645.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids2_trim150_scaffold_1183_curated_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..1419)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D4A89
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK84438.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
scnpilot_solids2_trim150_scaffold_1183_curated_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1659..3065)
DNA (1407bp) protein (469aa)
DAHP synthetase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-7-phosphoheptulonate synthase, class II n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZJ8_9RHIZ
3-deoxy-7-phosphoheptulonate synthase, class II {ECO:0000313|EMBL:EIM29390.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_1183_curated_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3110..4078)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X430_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL50636.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids2_trim150_scaffold_1183_curated_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4279..5076)
DNA (798bp) protein (266aa)
Methylglutaconyl-CoA hydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBS8_9BRAD
Methylglutaconyl-CoA hydratase {ECO:0000313|EMBL:ERF81045.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_1183_curated_7
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5078..6208)
DNA (1131bp) protein (377aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EYD75169.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EYD75169.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
Iron-containing alcohol dehydrogenase; K00100 [EC:1.1.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E9043E
scnpilot_solids2_trim150_scaffold_1183_curated_8
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6308..6760)
DNA (453bp) protein (151aa)
Transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H9Q6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EPE95587.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1183_curated_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6940..8748
DNA (1809bp) protein (603aa)
Chloride channel protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J9K8_AGRRK
chloride channel protein
Putative chloride channel {ECO:0000313|EMBL:GAJ94049.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
scnpilot_solids2_trim150_scaffold_1183_curated_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..10084
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F4F5A2
Uncharacterized protein {ECO:0000313|EMBL:KKB07422.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
major facilitator superfamily transporter
scnpilot_solids2_trim150_scaffold_1183_curated_11
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..11477)
DNA (1401bp) protein (467aa)
glutathione reductase (EC:1.8.1.7); K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
NADPH-glutathione reductase {ECO:0000313|EMBL:ABA04485.1}; EC=1.8.1.7 {ECO:0000313|EMBL:ABA04485.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003061406
scnpilot_solids2_trim150_scaffold_1183_curated_12
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11789..12328)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M271_METRJ
hypothetical protein; K09924 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB24682.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
scnpilot_solids2_trim150_scaffold_1183_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12482..13186)
DNA (705bp) protein (235aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ribose 5-phosphate isomerase; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D8F02
scnpilot_solids2_trim150_scaffold_1183_curated_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13287..14111
DNA (825bp) protein (275aa)
Esterase/acetylhydrolase (Modular protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVS4_AZOBR
esterase/acetylhydrolase; (modular protein)
Esterase/acetylhydrolase (Modular protein) {ECO:0000313|EMBL:CCD02033.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids2_trim150_scaffold_1183_curated_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14428..15903)
DNA (1476bp) protein (492aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KGM34148.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KGM34148.1};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinic semialdehyde dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAD9_RHOPT
scnpilot_solids2_trim150_scaffold_1183_curated_16
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15999..16367)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031EB19F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK49101.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_1183_curated_17
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16449..17120
DNA (672bp) protein (224aa)
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Phosphoglycolate phosphatase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UC69_METS4
scnpilot_solids2_trim150_scaffold_1183_curated_18
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17277..18218
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035F870D
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACA16793.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_1183_curated_19
unknown

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18567..18626
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 19 items

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