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scnpilot_solids2_trim150_scaffold_1697_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1697_curated_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..951
DNA (951bp) protein (317aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase AAA n=1 Tax=Methylopila sp. M107 RepID=UPI000382AB6A
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADH89782.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_1697_curated_2
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

959..1885
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035D5CC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY29859.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
scnpilot_solids2_trim150_scaffold_1697_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1890..4745
DNA (2856bp) protein (952aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DFD94A
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46483.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1697_curated_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4745..6832
DNA (2088bp) protein (696aa)
Threonine dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDM3_9RHOB
Threonine dehydrogenase {ECO:0000313|EMBL:EJW11586.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1697_curated_5
bacterium YEK0313, Bacteria

Not on your lists

comp(6967..7467)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IK00_METNO
Uncharacterized protein {ECO:0000313|EMBL:CEJ14205.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_1697_curated_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7607..8017)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BKC5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07236.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1697_curated_7
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8130..8609)
DNA (480bp) protein (160aa)
NUDIX hydrolase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219J1_RHOPB
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KFG67535.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
NUDIX hydrolase
scnpilot_solids2_trim150_scaffold_1697_curated_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8655..9626
DNA (972bp) protein (324aa)
Metallophosphoesterase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJ60_METS4
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACA21072.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_1697_curated_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9623..10102
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036FD75C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86716.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_solids2_trim150_scaffold_1697_curated_10
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10089..10931)
DNA (843bp) protein (281aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F3Y7_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ESZ29449.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1697_curated_11
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11038..11952
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAC1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13168.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1697_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11909..12655)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312080E
Putative toluenesulfonate zinc-independent alcohol dehydrogenase oxidoreductase {ECO:0000313|EMBL:KFC66708.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative short-chain dehydrogenase; putative 3-oxoacyl-[acyl-carrier-protein] reductase
scnpilot_solids2_trim150_scaffold_1697_curated_13
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

12809..13801
DNA (993bp) protein (331aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313ABFD
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CCQ90138.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
scnpilot_solids2_trim150_scaffold_1697_curated_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13788..14075
DNA (288bp) protein (96aa)
fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313ABFD
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KFG70641.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_1697_curated_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14088..14963
DNA (876bp) protein (292aa)
Dml; 2,3-dimethylmalate lyase (EC:4.1.3.32)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Bacillus cereus VD133 RepID=R8DP27_BACCE
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EOO25574.1}; TaxID=1053233 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD133.;"
scnpilot_solids2_trim150_scaffold_1697_curated_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..17328)
DNA (2277bp) protein (759aa)
lead, cadmium, zinc and mercury-transporting ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Lead, cadmium, zinc and mercury-transporting ATPase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAT6_9RHIZ
Lead, cadmium, zinc and mercury-transporting ATPase {ECO:0000313|EMBL:ENN88167.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
scnpilot_solids2_trim150_scaffold_1697_curated_17
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17376..17801
DNA (426bp) protein (142aa)
MerR family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000377F6A2
regulatory protein MerR
Putative HTH-type transcriptional regulator PA4778 {ECO:0000313|EMBL:CDM59059.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
scnpilot_solids2_trim150_scaffold_1697_curated_18
bacterium YEK0313, Bacteria

Not on your lists

comp(17855..19330)
DNA (1476bp) protein (492aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DBD283
Aldehyde dehydrogenase PuuC {ECO:0000313|EMBL:CEJ14184.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1697_curated_19
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19432..19809)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA16_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86652.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1697_curated_20
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19882..20622)
DNA (741bp) protein (247aa)
Cytochrome c-type biogenesis protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RGV6_9RHIZ
Cytochrome c-type biogenesis protein {ECO:0000313|EMBL:ESR24604.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
ccdA; cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
scnpilot_solids2_trim150_scaffold_1697_curated_21
unknown

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20857..21132
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1697_curated_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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21220..22191
DNA (972bp) protein (324aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
scnpilot_solids2_trim150_scaffold_1697_curated_23
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22192..22740)
DNA (549bp) protein (183aa)
FAD dependent oxidoreductase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ84_9PROT
oxidoreductase, FAD-binding family protein
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH12634.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Displaying 23 items

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