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scnpilot_solids2_trim150_scaffold_332_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_332_curated_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKQ5_9RHIZ
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIM24547.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_332_curated_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

411..1121
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037569F2
Alkaline phytoceramidase (APHC) {ECO:0000313|EMBL:EIM24548.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_332_curated_3
bacterium YEK0313, Bacteria

Not on your lists

comp(1126..2238)
DNA (1113bp) protein (371aa)
Oxidoreductase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PVL3_9RHOB
NADPH dehydrogenase {ECO:0000313|EMBL:CEJ13523.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NADH:flavin oxidoreductase
scnpilot_solids2_trim150_scaffold_332_curated_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2323..2607)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULX3_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA21170.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_332_curated_5
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2779..3378
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_01017}; EC=1.6.5.2 {ECO:0000255|HAMAP-Rule:MF_01017};; Flavoprotein WrbA; NAD(P)H:quinone oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01017}; Short=NQO {ECO:0000255|HAMAP-Rule:MF_01017};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=NQOR_AZOC5
wrbA; TrpR binding protein WrbA; K03809 Trp repressor binding protein
scnpilot_solids2_trim150_scaffold_332_curated_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3435..3587)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHE2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:ETR74944.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_332_curated_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3661..5526)
DNA (1866bp) protein (622aa)
Putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZA5_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:EWY35991.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein
scnpilot_solids2_trim150_scaffold_332_curated_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5530..6405)
DNA (876bp) protein (292aa)
Dipeptide transport system permease protein dppC (ABC transporter) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZA6_AZOBR
ABC transporter permease {ECO:0000313|EMBL:EWY35992.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
dppC; dipeptide transport system permease protein dppC (ABC transporter)
scnpilot_solids2_trim150_scaffold_332_curated_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6395..7351)
DNA (957bp) protein (319aa)
ABC transport protein inner membrane component n=6 Tax=Bordetella RepID=K0MID1_BORPB
ABC transporter {ECO:0000313|EMBL:EWY35993.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter inner membrane protein
scnpilot_solids2_trim150_scaffold_332_curated_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7370..8869)
DNA (1500bp) protein (500aa)
Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZA8_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJR62918.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
yliB; putative peptide transporter subunit: periplasmic-binding component of ABC superfamily
scnpilot_solids2_trim150_scaffold_332_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8893..9564)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHX5_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_332_curated_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9561..10799)
DNA (1239bp) protein (413aa)
Endoribonuclease L-PSP n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIH5_XANP2
Uncharacterized protein {ECO:0000313|EMBL:ETX05317.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_332_curated_13
bacterium YEK0313, Bacteria

Not on your lists

comp(10827..12077)
DNA (1251bp) protein (417aa)
UPI0003CE5208 related cluster n=1 Tax=unknown RepID=UPI0003CE5208
Putative succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEJ10414.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptidase
scnpilot_solids2_trim150_scaffold_332_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12218..13699)
DNA (1482bp) protein (494aa)
D-hydantoinase DHPase {ECO:0000313|EMBL:KFC64997.1}; EC=3.5.2.2 {ECO:0000313|EMBL:KFC64997.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-hydantoinase(Dihydropyrimidinase) (DHPase) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQ15_9BRAD
D-hydantoinase
scnpilot_solids2_trim150_scaffold_332_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13771..14430
DNA (660bp) protein (220aa)
Putative hydantoin racemase HyuA n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZD97_9BRAD
Putative hydantoin racemase HyuA {ECO:0000313|EMBL:KFC64998.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative hydantoin racemase HyuA
scnpilot_solids2_trim150_scaffold_332_curated_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14452..15828)
DNA (1377bp) protein (459aa)
Uncharacterized protein involved in propionate catabolism n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1M7_9RHIZ
Uncharacterized protein involved in propionate catabolism {ECO:0000313|EMBL:EIM30119.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
MmgE/PrpD family protein
scnpilot_solids2_trim150_scaffold_332_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15841..17127)
DNA (1287bp) protein (429aa)
allantoate amidohydrolase (EC:3.5.1.87)
Allantoate amidohydrolase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X1V4_9RHIZ
Hydantoinase/carbamoylase family amidase {ECO:0000313|EMBL:KFC64999.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_332_curated_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17171..18127)
DNA (957bp) protein (319aa)
arginase/agmatinase/formiminoglutamase; K01480 agmatinase [EC:3.5.3.11]
Arginase/agmatinase/formiminoglutamase n=1 Tax=Nitratireductor indicus C115 RepID=K2NZ33_9RHIZ
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:EKF44510.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_332_curated_19
bacterium YEK0313, Bacteria

Not on your lists

comp(18158..19552)
DNA (1395bp) protein (465aa)
Amidohydrolase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMC6_9PROT
Atrazine chlorohydrolase {ECO:0000313|EMBL:CEJ13065.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative hydrolase
scnpilot_solids2_trim150_scaffold_332_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19701..20600)
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W6C9_9BRAD
Putative Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:KFC65001.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_332_curated_21
bacterium YEK0313, Bacteria

Not on your lists

20952..21806
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJN4_BRASB
Uncharacterized protein {ECO:0000313|EMBL:CEJ10095.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_332_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21902..23518
DNA (1617bp) protein (539aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FC035C
Putative ABC transporter, extracellular substrate binding protein {ECO:0000313|EMBL:KFC70524.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter extracellular substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_332_curated_23
bacterium YEK0313, Bacteria

Not on your lists

23539..24516
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1B0_RHOP2
Glutathione transport system permease protein GsiC {ECO:0000313|EMBL:CEJ10093.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_332_curated_24
bacterium YEK0313, Bacteria

Not on your lists

24521..25351
DNA (831bp) protein (277aa)
Peptide/nickel transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKD9_9BRAD
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:CEJ10092.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_332_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25348..26982
DNA (1635bp) protein (545aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1B2_RHOP2
ABC transporter related protein {ECO:0000313|EMBL:KFC70521.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_332_curated_26
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27145..28299)
DNA (1155bp) protein (385aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAQ16597.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAQ16597.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cystathionine gamma-synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC6_NITHX
scnpilot_solids2_trim150_scaffold_332_curated_27
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28500..29228
DNA (729bp) protein (243aa)
Methyltransferase type 11 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMZ4_MESCW
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADV10437.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_332_curated_28
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29285..30427
DNA (1143bp) protein (381aa)
acetylornithine deacetylase (EC:3.5.1.16); K01438 acetylornithine deacetylase [EC:3.5.1.16]
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YID6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS40345.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
scnpilot_solids2_trim150_scaffold_332_curated_29
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30605..31453)
DNA (849bp) protein (283aa)
Ser/Thr phosphatase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN61_9PROT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFH11263.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_332_curated_30
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31501..32322)
DNA (822bp) protein (274aa)
PREDICTED: probable sulfate transport system permease protein cysT-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12DE8
Uncharacterized protein {ECO:0000313|EMBL:KEJ95427.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
Displaying items 1-30 of 45 in total

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