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scnpilot_solids2_trim150_scaffold_1901_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1901_curated_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1119
DNA (1119bp) protein (373aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPN0_9RHIZ
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KFG69215.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein; K07276 hypothetical protein
scnpilot_solids2_trim150_scaffold_1901_curated_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1116..2075
DNA (960bp) protein (320aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Thioredoxin reductase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ET88_METSB
scnpilot_solids2_trim150_scaffold_1901_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2091..2345
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJX3_METNO
hypothetical protein
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ48360.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
scnpilot_solids2_trim150_scaffold_1901_curated_4
bacterium YEK0313, Bacteria

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2348..2830
DNA (483bp) protein (161aa)
Competence/damage-inducible protein CinA domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4U5_9PROT
Putative competence-damage inducible protein {ECO:0000313|EMBL:CEJ14910.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative competence-damaged protein, CinA like protein
scnpilot_solids2_trim150_scaffold_1901_curated_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2906..4126)
DNA (1221bp) protein (407aa)
Chromate transporter, CHR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8R8_9CAUL
Chromate transporter {ECO:0000313|EMBL:KFL29376.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
chromate transporter; K07240 chromate transporter
scnpilot_solids2_trim150_scaffold_1901_curated_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4278..5573
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00036C318C
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS15189.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_1901_curated_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5723..8128)
DNA (2406bp) protein (802aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QR34_9BRAD
putative dehydrogenase
scnpilot_solids2_trim150_scaffold_1901_curated_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8277..8738
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBR0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35743.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
asnC; transcriptional regulator
scnpilot_solids2_trim150_scaffold_1901_curated_9
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8759..9253
DNA (495bp) protein (165aa)
Glutathione-dependent formaldehyde-activating protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GTX4_CUPNN
glutathione-dependent formaldehyde-activating protein
Alanine acetyltransferase {ECO:0000313|EMBL:EYS85158.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
scnpilot_solids2_trim150_scaffold_1901_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9379..10665)
DNA (1287bp) protein (429aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Z4_9RHIZ
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:KFC64084.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_1901_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10837..11733
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E99EA7
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC73945.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
lysR; transcriptional regulator
scnpilot_solids2_trim150_scaffold_1901_curated_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12053..12352)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000302F5AE
Oxidoreductase {ECO:0000313|EMBL:KGM33429.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oxidoreductase molybdopterin binding domain-containing protein; K07147
Displaying 12 items

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