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scnpilot_solids2_trim150_scaffold_1755_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1755_curated_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..616
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2U8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX20129.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_2
unknown

Not on your lists

628..825
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_3
unknown

Not on your lists

828..1067
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1072..1797
DNA (726bp) protein (242aa)
Soluble lytic transglycosylase, SLT domain n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z3M1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:BAR59149.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
soluble lytic transglycosylase, SLT domain
scnpilot_solids2_trim150_scaffold_1755_curated_5
unknown

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1794..2009
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_6
unknown

Not on your lists

2009..2209
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_7
unknown

Not on your lists

2209..2409
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2409..3266
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037F5AA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH78720.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
scnpilot_solids2_trim150_scaffold_1755_curated_9
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3244..3627
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036F938F
Two-component response regulator {ECO:0000313|EMBL:EAP89150.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
CzcR-like response regulator
scnpilot_solids2_trim150_scaffold_1755_curated_10
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3624..4307
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JP77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT49087.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4553..4813
DNA (261bp) protein (87aa)
UPF0335 protein A33M_3404 n=1 Tax=Rhodovulum sp. PH10 RepID=J6LD48_9RHOB
UPF0335 protein A33M_3404 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4827..5048
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR89750.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
scnpilot_solids2_trim150_scaffold_1755_curated_13
Komagataeibacter europaeus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5045..5446
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta RepID=R7UYR7_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:GAN97580.1}; TaxID=1234669 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter europaeus NBRC 3261.;"
Mu-like prophage protein gp16
scnpilot_solids2_trim150_scaffold_1755_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5446..5685
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QCK6_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE99219.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids2_trim150_scaffold_1755_curated_15
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5687..6097
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003748F9E
Uncharacterized protein {ECO:0000313|EMBL:EEQ96355.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6221..6775
DNA (555bp) protein (185aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KSU1_METC4
peptidoglycan-binding protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ACK82443.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
scnpilot_solids2_trim150_scaffold_1755_curated_17
unknown

Not on your lists

6775..7038
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1755_curated_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..7418
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000370405F
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:ACE99223.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids2_trim150_scaffold_1755_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7432..7617
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00036479DF
Uncharacterized protein {ECO:0000313|EMBL:CDN93438.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7614..7973
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037898A3
Uncharacterized protein {ECO:0000313|EMBL:KEC73922.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_21
Rhodobacter phage RC1, Caudovirales, Viruses

Not on your lists

7970..8269
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=dsDNA viruses, no RNA stage RepID=M4SPS4_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH58048.1}; TaxID=754055 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhodobacter phage RC1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1755_curated_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8272..8856
DNA (585bp) protein (195aa)
Mu-like prophage FluMu protein GP27 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8Q5_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:ETR78881.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Mu-like prophage FluMu protein GP27
scnpilot_solids2_trim150_scaffold_1755_curated_23
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8849..10567
DNA (1719bp) protein (573aa)
Mu-like prophage FluMu protein gp28 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7N6_AZOC5
Mu-like prophage FluMu protein gp28
Mu-like prophage FluMu protein gp28 {ECO:0000313|EMBL:BAF88140.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_1755_curated_24
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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10577..12175
DNA (1599bp) protein (533aa)
Mu-like prophage protein gp29 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J648_POLGS
gp29; Mu-like prophage protein gp29
Mu-like prophage protein gp29 {ECO:0000313|EMBL:ADZ72412.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1755_curated_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12300..13232
DNA (933bp) protein (311aa)
Conserved hypothetical phage protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J647_POLGS
hypothetical protein
Conserved hypothetical phage protein {ECO:0000313|EMBL:ADZ72411.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 25 items

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