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scnpilot_solids2_trim150_scaffold_1751_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1751_curated_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..476
DNA (474bp) protein (158aa)
Sugar-binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYU8_9PROT
Sugar-binding domain protein {ECO:0000313|EMBL:EHM01853.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
scrR; dna-binding sucrose operon transcriptional repressor transcription regulator protein
scnpilot_solids2_trim150_scaffold_1751_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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523..1944
DNA (1422bp) protein (474aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037B327A
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGM35209.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids2_trim150_scaffold_1751_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1960..2976
DNA (1017bp) protein (339aa)
Dipeptidase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZC3_9RHIZ
Dipeptidase {ECO:0000313|EMBL:EYR84367.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dipeptidase
scnpilot_solids2_trim150_scaffold_1751_curated_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2996..3964
DNA (969bp) protein (323aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YR30_9RHIZ
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:EIM26422.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
peptidase M19 renal dipeptidase
scnpilot_solids2_trim150_scaffold_1751_curated_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4086..4763)
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQ22_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KGF69778.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1751_curated_6
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4813..5232
DNA (420bp) protein (140aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1Z1A3_BURA4
TRAP dicarboxylate transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ACB67705.1}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;"
scnpilot_solids2_trim150_scaffold_1751_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5315..5896
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036F5148
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABZ73109.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids2_trim150_scaffold_1751_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5955..7142
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003136A95
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF02923.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids2_trim150_scaffold_1751_curated_9
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7148..10300
DNA (3153bp) protein (1051aa)
Putative component of multidrug efflux pump, acrB/acrD/acrF family n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q1T1_9RHIZ
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:KIV66808.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
scnpilot_solids2_trim150_scaffold_1751_curated_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10364..10936)
DNA (573bp) protein (191aa)
NADPH-dependent FMN reductase n=2 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y051_MESOW
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AEH89341.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_1751_curated_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11044..11892)
DNA (849bp) protein (283aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QD63_9RHIZ
Endonuclease {ECO:0000313|EMBL:EXL09378.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Endonuclease/exonuclease/phosphatase; K06896
scnpilot_solids2_trim150_scaffold_1751_curated_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12005..13303)
DNA (1299bp) protein (433aa)
cls; cardiolipin synthethase transmembrane protein; K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthethase transmembrane protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKS0_AGRRK
Cardiolipin synthetase {ECO:0000313|EMBL:EXL09379.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_1751_curated_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13609..13959)
DNA (351bp) protein (117aa)
Arabinose efflux permease family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WCI1_RHILT
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJC82918.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
arabinose efflux permease family protein
Displaying 13 items

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