ggKbase home page

scnpilot_solids2_trim150_scaffold_2681_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2681_curated_1
Providencia rustigianii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
putative NADP-dependent oxidoreductase (EC:1.-.-.-)
Oxidoreductase, zinc-binding dehydrogenase family protein n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3G8_9ENTR
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EFB72084.1}; TaxID=500637 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia rustigianii DSM 4541.;"
scnpilot_solids2_trim150_scaffold_2681_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(527..1798)
DNA (1272bp) protein (424aa)
Major facilitator superfamily MFS_1 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TME1_9PROT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC64631.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transporter major facilitator superfamily(MFS)
scnpilot_solids2_trim150_scaffold_2681_curated_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1827..2837)
DNA (1011bp) protein (337aa)
UPI0003CF2062 related cluster n=1 Tax=unknown RepID=UPI0003CF2062
Uncharacterized protein {ECO:0000313|EMBL:ESW79265.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
NHL repeat containing protein
scnpilot_solids2_trim150_scaffold_2681_curated_4
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3131)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJF4_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB80057.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids2_trim150_scaffold_2681_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3697..5283)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA925A
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HemY domain-containing protein; K02498 HemY protein
scnpilot_solids2_trim150_scaffold_2681_curated_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5294..6577)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LIJ2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW12663.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2681_curated_7
bacterium YEK0313, Bacteria

Not on your lists

comp(6666..7373)
DNA (708bp) protein (236aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
uroporphyrinogen III synthase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037B80F6
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CEJ16237.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_2681_curated_8
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..8308)
DNA (933bp) protein (311aa)
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Porphobilinogen deaminase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IAW6_BEII9
scnpilot_solids2_trim150_scaffold_2681_curated_9
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8475..8993
DNA (519bp) protein (173aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=395963 species="Bacteria; Proteobacteria; Alphapro
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IAW5_BEII9
Displaying 9 items

View Taxonomy